Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2075 ATGGCGCCCGATCCCAATCGCGCCGCCGCCGGAGGCTCCAGCAGCAGCGGCACCGCCAAGGACGACGCCGTCGCCAAGAAGAAGGTCGAGAGCGAAGATCTGTCGGATGAGGATTTGGCGTTGAAGCAGCAGCTGGAGCTGTACGTGGAGAGGGTTCAAGATCCCGACCAAGGGTTGCAGAAGGTTGCACTTGAGAGCATGAGACAAGAAATTCGCACTTCAACCAGCTCCATGACTTCAGTTCCTAAGCCGTTGAAGTTCCTTCGTCCACATTATGTAACTTTGAAGGCGTATTATGATACTATGGCAGATTCTGATTTGAAGAAGTACTTAGCGGACATATTATCAGTTTTGGCCCTTACAATGTCTGCTGAGGGGGAGAGAGAAAGCCTCAAGTACAGATTACTGGGTTCAGAGGGTGATATTGGTTCATGGGGACATGAGTATGTTAGGAATCTGGCTGGGGAAATTGCACAAGAGTATGCAAAACGACAGAGTGAAGAGGCCCCCATAGACGATCTCATGGAACTTGTGCAGCAAATAGTTGCTTTTCACATGAAGCACAATGCTGAGCCTGAAGCTGTTGATCTTTTGATGGAGGTTGAAGACCTTGATATGTTGGTTGAACATGTTGACAAGACAAATTTTAAGAGAACCTGTCTATACCTCACCAGTTCAGCTAGATACCTCCCTGGACCAGATGATATGTTAGTCTTGGACATTGCATATTTGATCTATCTAAAATTTGAGGAATTTCCAAATGCACTCCAAATTGCATTGTTCCTGGATAACCTGCAGTATGTGAGGCAGGTGTTTACCTCTTGTGATGATGTGCTGCGAAAGAAGCAATTTTGTTATATACTTGCACGTCATGGAATTACTTTTGAGCTTGACGAGGAAATGGTTGCAGATGATGAGGACAGAGAAATGTTGCAGGAAATCATAAACAATTCTAAGTTAAGTGAAGGATATCTGACCCTTGCTCGTGATATTGAAGTCATGGAGCCCAAGTCCCCTGAGGATATATACAAGGCCCACTTGCTTGATGGTCGGGCTAGTGCCGGTGCAAGTGTTGATTCAGCTAGGCAGAACCTTGCTGCCACTTTTGTGAATGCATTTGTAAATGCTGGCTTTGGTCAGGATAAGTTAATGACTCTCACATCTGACTCTTCAACTAGTGGTTCCTCTGGAAATTGGCTTTTCAAAAATAAGGAACATGGAAAGACTAGTGCTGCAGCTAGTTTGGGTATGATTTTACTCTGGGATGTTGACTCTGGACTTGCACAAATTGATAAGTACTTCCATAATACTGATAACCATGTCATTGCGGGTGCATTATTGGGAGTTGGAATTGTCAATTGTAGTATCAAGAATGACTGTGATCCTGCAATGGCACTTCTTGGTGACTACACAGATAGAGAAGACGCTTCAATCAGGATTGGTGCAATTATGGGGTTGGGAATTGCTTACGCAGGCTCCCAGAATGAGCAGTTACGATACAAATTGGCCCCTATACTGAATGATGCTAAGGCTTCACTTGATGTGATTGCTTTCACTGCTATTTCATTGGGCTTGATCTATGTGGGTTCTTGCAATGAGGAAGTTGCTCAAGCAATTATACTTGCACTAATGGATCGGAGTGAGTCAGAGTTGGGAGAGCCTCTCACGAGATTCTTGCCTCTTGGGCTTGGTCTTCTATATCTTGGGAAGCAGGAAAACGTGGAGGCAACTGCTGAAGTTTCAAAAACTTTTAATGAAAAAATTAGAAAGTATTGTGACATGACACTGCTATCATGTGCCTATGCTGGAACTGGGAATGTTCTCAAGGTTCAAAATCTCTTGGGTCATTGTTCACAACATCTCGATAAAGGTGAAACACACCAGGGCCCTGCTGTGCTAGGCATTGCTATGGTAGCAATGGCTGAAGAATTAGGACTTGAGATGGCAATTCGTTCATTAGAACATCTTCTACAGTATGGAGAGCAAAATATCCGCCGAGCAGTACCTCTGGCACTTGGTCTACTGTGTATATCAAATCCAAAGGTCAATGTTATGGATACCTTGAGCAGACTTAGCCATGATACTGATTTAGAAGTAGCGATGGCAGCTGTTATCTCCTTGGGTCTAATAGGTGCTGGAACAAACAATGCCCGAATTGCTGGCATGCTTCGTAATCTTTCAAGCTATTACTACAAGGATACCAGCCTTCTGTTTTGTGTGCGGATTGCCCAAGGTCTTGTGCATTTGGGGAAGGGCTTGCTTACACTTAATCCATATCATTCTGATCGTTTCTTATTATCACCGACAGCACTTGCTGGACTTGTTACTATGTTGCATGCATGCCTTGATATGAAAGCTATTGTCTTGGGAAAATATCACTATGTTCTCTACTTCCTCGTTTTGGCAATGCAGCCAAGGATGTTGTTGACTGTGGATGAGAACCTGAAGCCTCTTTCAGTACCTGTTAGGGTTGGTCAAGCAGTTGATGTCGTTGGACAAGCAGGTCGACCCAAGACAATCACTGGTTTTCAGACCCACTCCACTCCAGTCCTCCTTGCTGCCGGAGATAGGGCAGAACTTGCAACGGAGAAGTATATACCCTTATCACCGATTCTAGAAGGTTTTGTTATCTTGAAAGAGAATCCAGATTACAGGGAAGAATGA 2664 0.4437 MAPDPNRAAAGGSSSSGTAKDDAVAKKKVESEDLSDEDLALKQQLELYVERVQDPDQGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYVTLKAYYDTMADSDLKKYLADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEYAKRQSEEAPIDDLMELVQQIVAFHMKHNAEPEAVDLLMEVEDLDMLVEHVDKTNFKRTCLYLTSSARYLPGPDDMLVLDIAYLIYLKFEEFPNALQIALFLDNLQYVRQVFTSCDDVLRKKQFCYILARHGITFELDEEMVADDEDREMLQEIINNSKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTLTSDSSTSGSSGNWLFKNKEHGKTSAAASLGMILLWDVDSGLAQIDKYFHNTDNHVIAGALLGVGIVNCSIKNDCDPAMALLGDYTDREDASIRIGAIMGLGIAYAGSQNEQLRYKLAPILNDAKASLDVIAFTAISLGLIYVGSCNEEVAQAIILALMDRSESELGEPLTRFLPLGLGLLYLGKQENVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCSQHLDKGETHQGPAVLGIAMVAMAEELGLEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDLEVAMAAVISLGLIGAGTNNARIAGMLRNLSSYYYKDTSLLFCVRIAQGLVHLGKGLLTLNPYHSDRFLLSPTALAGLVTMLHACLDMKAIVLGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGDRAELATEKYIPLSPILEGFVILKENPDYREE* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2075 887 Pfam 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal 831 884 IPR041433 -
Dod03g2075 887 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 20 886 - -
Dod03g2075 887 MobiDBLite consensus disorder prediction 1 37 - -
Dod03g2075 887 PIRSF 26S_protsm_Rpn1 3 627 IPR016643 GO:0000502|GO:0030234|GO:0042176
Dod03g2075 887 PIRSF 26S_protsm_Rpn1 622 887 IPR016643 GO:0000502|GO:0030234|GO:0042176
Dod03g2075 887 Pfam RPN1 N-terminal domain 45 347 IPR040892 -
Dod03g2075 887 MobiDBLite consensus disorder prediction 21 37 - -
Dod03g2075 887 SUPERFAMILY ARM repeat 42 751 IPR016024 -
Dod03g2075 887 Gene3D - 350 793 IPR011989 -
Dod03g2075 887 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 20 886 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2075 K03028 - gmx:100777078 1582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2075 03 48929685 48937875 Dod03g2075 03 48929685 48937875 ECH