Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1978 ATGAGACGGGAGTGTCATCCATTGCTGAGGGGAGGGAGAGGGGACAACAAATACAGACATGGGTTTTCTTTGGCTGAAATGGAGTCACTGGCAAGTATATGTGAGGTTGTGGTGCCTCCCTTGCCAATGGACAATCTCAAGATCATGAAAGAAGAAGACCAAGCAACTGATGGGGATGGGCCTAACAAGGATGTGCAGTCCTTCTGGAACATTTCTGCTTCTCGCTATCCAATTCCTCATGAGCTTGCAGAGAAGTTAGTGCAGAGGGGCCTAATAGAAGCAGTAATACTGATTAGAGTGATTTTATGGCTGCTAGCAACGAGGTTGGGCACCTTGCTGCTTTGCGGTTTGCTCTGTCTTGGTGACAAGTGGCCCTTTATCAACACCTTCTCAAACATATCTCTGGAGAAAAGAGAAAAGATTGTGCAGAAATGGCTGCAGCATAGGTTCCTCACACCTATTAGACTTGCATTTGCTTACATCAAAGTTTTATGCCTCTATGTTTTCTTCTCTTGGGTTGACGAAAATGGTGACAACCCAGCATGGAAAGGCATTGGATATGAGGTGGCTGCTGATGAGAAATTGGCTAATGTTTCCAACAAGAGGCCCCTTGAAAAGGGGATTATAGAAACCGTGAATGAGTCTGACTCAACCTTTCAACAATCCCTTGCTGAGAAAGGCCTCAATGTTACACTGGACTCCGAAAACAATATCCTCAGAGTCCAATGTGATGCAGTAGTTGTTGGGTCAGGTTGTGGTGGAGGTGTTGCAGCTTCTGCTCTTTCAAGTGCTGGCCACAAGGTTGTTGTCCTTGAGAAAGGCAACTATTTTGCTCCCAAGGACTATTCCTCTCTAGAGGGGCCTTCCATGGATCAATTATATGAAACTGGAGGGATCCTTGCTTCTGTGGACTCCAGAATACTTCTGATGGCAGGATCAACTGTGGGTGGTGGCTCTGCTGTTAATTGGTCAGCCTGCATTAGAACACCACAAAGTGTGCTCAAAGAGTGGACTGAGGACCACAAGCTTCCCCTCTTTTCAACCCTAGAGTATCTCTCTGCAATGGAAACTGTGTGTGAAAGAATTGGTGTCGCAGAAAATTGCACACAGGAGGGTTTCCAAAATCAGGTACTAAGAAAAGGGTGTCAAAATCTAGGCCTGAAAGTTGATTATGTGCCAAGAAACTCATCAGGGAACCATTACTGTGGTTCTTGCGGTTATGGTTGCCCAACAGGAGAGAAACAAGGGACTAAAGAAACATGGCTTGTAAATGCTGTTGACAATGGTGCAGTGATAATAACAGGATGCAAGGCTGAGAGGTTCTTGTTGGAAAGCAACAAGAGTGGAAGTGCCAGAAAGAAAAAATGCTTGGGAGTTTTGGCAAAAGCCTTAAGCAGTAGAGTCACAATGAAGATCCAAATTGAGGCCAAAGTGACAGTTTCTGCAGGTGGGGCACTTCTGACACCCCCCTTGATGATCTCTAGTGGGTTAAGGAATAAGAACATTGGTAGGAACCTTCATCTCCACCCTGTCCTAATGACTTGGGGATACTTTCCTGACTCAATGCCAGAGCTCAAAGGTAAAGTCTATGAGGGAGGTATAATCACTTCAGTCCACAAGGTGCCATCAGAAGACACCAACATGGACACAAGAGCCATCATTGAAACTCCTTCGCTAGGACCAGCATCCTTTGCTTCACTATGCCCTTGGGAGTCTGGACTTGACTTCAAAGAAAGAATGCTCAAGTACTCAAGAACTTCTCATTTGATCACAATAATCAGAGACACAGCTTGTGGAGAAGTGACAACAGAAGGAAGGATCAGCTACAAACTGTCTGCAATTGACAAAGAGAACATGAGGGCTGGCCTGCAGCAAGCACTGAGGATCCTAATAGCTGCAGGAGCAGCTGAAGTTGGCACTCACAGAAGTGATGGTCAGAGACTCAAGTGTGATGAGGTTAGTGACAGTGAAGTGGAGGAGTTCTTGGACAGTGTGTATCCAATGGAGGGGGCACTGTCACCAGGTGAGAAGTGGAACATTTATACTTCTGCACATCAGATGGGGAGCTGCAGAATGGGAGCCAGTGAGAAAGAAGGTGCAGTTAATGAGAATGGGGAGAGCTGGGAGGCTGAAGGCTTGTTTGTTTGTGATGCAAGTGTGCTTCCCACTGCAGTTGGTGTCAACCCCATGATCACAATCCAGTCAACTGCATACTGTATCTCAAATAGAATAATTGATTATCTTAGAAAGGAGTAA 2256 0.4574 MRRECHPLLRGGRGDNKYRHGFSLAEMESLASICEVVVPPLPMDNLKIMKEEDQATDGDGPNKDVQSFWNISASRYPIPHELAEKLVQRGLIEAVILIRVILWLLATRLGTLLLCGLLCLGDKWPFINTFSNISLEKREKIVQKWLQHRFLTPIRLAFAYIKVLCLYVFFSWVDENGDNPAWKGIGYEVAADEKLANVSNKRPLEKGIIETVNESDSTFQQSLAEKGLNVTLDSENNILRVQCDAVVVGSGCGGGVAASALSSAGHKVVVLEKGNYFAPKDYSSLEGPSMDQLYETGGILASVDSRILLMAGSTVGGGSAVNWSACIRTPQSVLKEWTEDHKLPLFSTLEYLSAMETVCERIGVAENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPTGEKQGTKETWLVNAVDNGAVIITGCKAERFLLESNKSGSARKKKCLGVLAKALSSRVTMKIQIEAKVTVSAGGALLTPPLMISSGLRNKNIGRNLHLHPVLMTWGYFPDSMPELKGKVYEGGIITSVHKVPSEDTNMDTRAIIETPSLGPASFASLCPWESGLDFKERMLKYSRTSHLITIIRDTACGEVTTEGRISYKLSAIDKENMRAGLQQALRILIAAGAAEVGTHRSDGQRLKCDEVSDSEVEEFLDSVYPMEGALSPGEKWNIYTSAHQMGSCRMGASEKEGAVNENGESWEAEGLFVCDASVLPTAVGVNPMITIQSTAYCISNRIIDYLRKE* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1978 751 PIRSF Lg_Ch_AO 8 751 IPR012400 GO:0046577
Dod03g1978 751 Gene3D - 663 747 IPR036188 -
Dod03g1978 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 750 - -
Dod03g1978 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 750 - -
Dod03g1978 751 SUPERFAMILY FAD/NAD(P)-binding domain 242 750 IPR036188 -
Dod03g1978 751 Pfam GMC oxidoreductase 244 511 IPR000172 GO:0016614|GO:0050660
Dod03g1978 751 Gene3D - 228 541 IPR036188 -
Dod03g1978 751 Pfam GMC oxidoreductase 606 739 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1978 Dod-Chr3 44793048 44799051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1978 84 744 Acyl Lipid Metabolism Gene Families AT3G23410 64.414 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1978 K17756 - gmx:100776182 1239.94