Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1976 ATGTCGGAGCGAGGTTGGGACTTTCACCTCCGAACGCTGTCCGACAGTTCCAGAGACTCCAACACAGCCAACGACCCTGCTTCCGACCCCTCTCTTCTTCACTCCGTGAAGAAGCTTCATGAGATTTGTAAGTCGGAGAATTCGGAGGACTTGGTAGCTAGGGTTTATCCCCATATCAACAAGATCTTCCAGCGCGCTGTCGCTTCCCTTTCTCAATCTCGAACCTCCAATGGCCTTCTCCTACTGGCAATTCTTCAGTTTTTTCTAGACTTTGGGGAGTTTGTTCTTCATGATGCTGATCCTAGTCTTAGGACATTTTTTCGTTCGTGTTTGAGCAGGGAATTTGCTGATCCTGTTGTTGCAGAAGCAACACTTGAATTTCTCATTTCCAGCAAGAAGAAACTACTAAGTTCCTTCCCTAACTTATTGCCTCAGTTTTTTCCATTGTTGTTAAAACTGGTCGCTTGGAATGCTGAAAGATTAGAGAAACAATTTTTGGAAGTTCTTCCGGGATTGATGTCACTTGGATCATTTATTCCATTATTCCCATATTTAGTAGATTTGCCACTTTTGGTAGTGGCATTGGAAAAGGTGGAAAAAAGCTCGGGACCACTAATTGGAAACAGCATAGCTTCAATTCAGAAGAACACTGGTCCTAAGATGCTACTTGCCCTAATGGATGAAGCATATACTGGTTCAACTATAGAAGATGGTGGAGGGGATTCTGAATCTGAGGATAGCAGTGCAATTGATGTTGCTGATCCTTTGTTCCTTGAGCTTTTGAAGGATGAAAATGATGGTATCGCTGAACGTCCCTGGTCATCTCCAGTGATGGCCAGTCTATTGCAGGCTGCAGTTAATAGTGCTTACTCTGATAGGCTGAAAGCAGTACTTAACCTGGCGCCTCATCTTCTTGATGTGTACTTCTCCATAGCATTGCGCGATGTCAATGATTCTTTGATCTGTGCATTGATTCCCCTGCTTATGTCAAGATTTGCTACAATATTTCCCGACAAAATATTTTCTTATGAGGTCCGTAAGCAGCTTTTGGAGTTTATGCTCTCTACATTTCGACACTCCCCAAATTTCATAGCTCTTTTGAAGAAGCCTATAATGGACAGACTTGGAGAAGCTTATGACAGCCCAGAAAAGACAGAATTGGCATTGCAATTATGTTGGGCCATTGGAGAGCATGGTGGAGGTGGTGGATCTCACAAAGACGAAGCTCGTGAGCTTTTTGAGAGTTTAGAACTACTTTTGTATGAAAACCTTTCTGCAAGTCGTCTGGGCATGACACAGGAGGCATCCCTTAGTCCTGATAAGGATACCTACAGACGGTCATCACAGTCCAGGCTTTTATGTTTTGTTGTAACAGCCATTGCAAAGCTTGCTACACACCATCGAGAATTACTACCAAGAGCCCGTGTATCATTGGGCAAGGTGGCTCGCACTCGAATTTCAGATGCAAGGGTGTGGAGACGTGCATGTGATTTTCTGGGTTTGATGAATGACCCTGCTGTATGTTCATCCATATTGGGGCCTTCACGTTCTTCACAAGGCACCACCCAGAAAGTCGGCAGCATAAACTGGAATGAAGGTGCAACAAAGATGGTTGCACATATTCCATTTTACATTCTAGGGGAACAAGAAGGACCGCCTTTTCATGATTTCTCATTCTCTGATATCCTTCCAAGAAGATGA 1701 0.4392 MSERGWDFHLRTLSDSSRDSNTANDPASDPSLLHSVKKLHEICKSENSEDLVARVYPHINKIFQRAVASLSQSRTSNGLLLLAILQFFLDFGEFVLHDADPSLRTFFRSCLSREFADPVVAEATLEFLISSKKKLLSSFPNLLPQFFPLLLKLVAWNAERLEKQFLEVLPGLMSLGSFIPLFPYLVDLPLLVVALEKVEKSSGPLIGNSIASIQKNTGPKMLLALMDEAYTGSTIEDGGGDSESEDSSAIDVADPLFLELLKDENDGIAERPWSSPVMASLLQAAVNSAYSDRLKAVLNLAPHLLDVYFSIALRDVNDSLICALIPLLMSRFATIFPDKIFSYEVRKQLLEFMLSTFRHSPNFIALLKKPIMDRLGEAYDSPEKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSASRLGMTQEASLSPDKDTYRRSSQSRLLCFVVTAIAKLATHHRELLPRARVSLGKVARTRISDARVWRRACDFLGLMNDPAVCSSILGPSRSSQGTTQKVGSINWNEGATKMVAHIPFYILGEQEGPPFHDFSFSDILPRR* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1976 566 Pfam AP-5 complex subunit, vesicle trafficking 28 152 IPR028222 GO:0044599
Dod03g1976 566 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 2 566 - -
Dod03g1976 566 SUPERFAMILY ARM repeat 35 398 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1976 K19025 - gmx:100796067 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1976 03 44672891 44693608 Dod03g1976 03 44672891 44693608 ECH