Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1973 ATGATCTCCGCAAGCAAACTCAAATCCGTTGATTTTTACAGAAAAATCCCAAGGGATTTGACAGAGGCATCAATATCAGGAGCAGGATTATCCATAATAGCAGCTCTCTCCATGATGTTTTTATTTGGAATGGAACTAAATAATTATTTGTCTGTAAGCACCTCTACATCAGTGATTGTTGACAAGAGTTCTGATGGGGACTTTTTACGTATAGATTTCAATATCAGTTTTCCTGCGCTCTCATGTGAATTTGCATCAGTTGATGTGAGCGATGTGCTGGGAACAAACAGGCTTAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTACGACCCACTGGTTCTGAGTTTAATTCAGGACCGGTTGCAAATTCTGTTAAGCATGATGATGAAGTAGATGAAGAATCTGTTGAAGGTTCTTTTTCACTCACCATGCAGAATTTTGATAAATGTATTCATCAGTTTCCGCTTACAGTTGTAAATTTTTATGCTCCTTGGTGTTCCTGGTGTCAGCGTTTGAAACCTTCATGGGAGAAGGCAGCTAAAATAATGAAAGAAAGGTATGATCCAGAAATGGATGGGCGTATTCTTTTAGCGAAGGTAGATTGCACTCAAGAAGGTGATTTATGCAGGAGGCACCACATACAAGGGTATCCGTCTATTCGTATCTTTCGGAAAGGAAGTGATGTCAGAAGTGATCATGGACATCATGAGCATGAGTCCTATTATGGAGATCGTGATACAGCAAGTCTAGTCAAGACAATGGAGAATTTGGTGGCATCTCTCCCAACAGAATCTCCGAAGCTAGCTTTGGAGGATAAATCCAATGCAACTGAGAATACAAAAAGACCAGCACCATCAGCTGGCGGATGTAGAGTTGAAGGATATGTACGTGTGAAAAAGGTTCCAGGAAACTTGATCATCTCAGCTAGATCGGAGTCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATATCATAAATCATCTGTCTTTTGGAAGGACAGTGACACCTAGGGCCATGAGTGATGTGAAGCGCTTGATACCTTATATAGGTAGCAGCCATGACAGGCTGAACGGCCGATCATTCATCAATTCTCGTGCATCAGACGCAAATGTTACTATAGAGCATTATATTCAGATAGTTAAAACAGAGGTAATAACTGGAAAAGGTTATAAATTACTTGAGGAGTACGAGTACACAGCGCACAGCAGTCTGGCTCACAGTGTAGACCTTCCTGTTGCAAAGTTCCATATTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAAAACCAGAAGTCTTTTTCACATTTTCTTACAAACGTCTGTGCTATTATTGGGGGCGTTTTCACGGTGGCTGGAATTATGGACTCAATCCTGCACAACACTATTAGAATGATGAAAAAAATTGAGCTTGGCAAAAATCTTTGA 1443 0.4019 MISASKLKSVDFYRKIPRDLTEASISGAGLSIIAALSMMFLFGMELNNYLSVSTSTSVIVDKSSDGDFLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGSEFNSGPVANSVKHDDEVDEESVEGSFSLTMQNFDKCIHQFPLTVVNFYAPWCSWCQRLKPSWEKAAKIMKERYDPEMDGRILLAKVDCTQEGDLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTASLVKTMENLVASLPTESPKLALEDKSNATENTKRPAPSAGGCRVEGYVRVKKVPGNLIISARSESHSFDASQMNMSHIINHLSFGRTVTPRAMSDVKRLIPYIGSSHDRLNGRSFINSRASDANVTIEHYIQIVKTEVITGKGYKLLEEYEYTAHSSLAHSVDLPVAKFHIELSPMQVLITENQKSFSHFLTNVCAIIGGVFTVAGIMDSILHNTIRMMKKIELGKNL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1973 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Dod03g1973 480 ProSiteProfiles Thioredoxin domain profile. 124 263 IPR013766 -
Dod03g1973 480 CDD PDI_a_family 146 258 - -
Dod03g1973 480 Pfam Thioredoxin 145 243 IPR013766 -
Dod03g1973 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 479 IPR045888 -
Dod03g1973 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 479 - -
Dod03g1973 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Dod03g1973 480 Pfam Endoplasmic reticulum vesicle transporter 288 461 IPR012936 -
Dod03g1973 480 Gene3D Glutaredoxin 131 288 - -
Dod03g1973 480 MobiDBLite consensus disorder prediction 267 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1973 Dod-Chr3 44469119 44493185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1973 - - aprc:113860202 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1973 03 44469119 44493185 Dod03g1973 03 44469119 44493185 ECH