Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1970 ATGTCGTCGTCGTCATCATCATCATCGGGTCCCGCCCCTCCACCCTACGACCTCCGATCCTTCAAGTTCGAGCCCATCAAGGAGTCCATCGTGTCGCGCGAGATGACCCGCAGGTACATGACCGACATGGTCACCCACGCCGACACCGACGTTGTCATCGTCGGCGCTGGCTCCGCAGGGCTGTCGTGCGCCTACGAGCTCAGCAAGAACCCTTCCGTCAAGATCGCCATCGTTGAGCAATCTGTTAGCCCTGGTGGCGGCGCTTGGCTCGGTGGCCAACTCTTCTCTGCCATGGTAGTGCGCAAGCCAGCACACATCTTCCTTGACGAGCTTGGCGTTGAGTACGATGAGCAGGACAACTACGTGGTGATCAAGCATGCTGCTTTGTTCACTTCCACCATCATGAGCAAGCTTTTGGCCAGGCCAAACGTGAAGCTCTTCAATGCTGTGGCAGCTGAGGACTTGATTGTGAAGAATGGGAGAGTTGGTGGGGTTGTGACTAATTGGGCCTTGGTTTCTATGAACCATGACACTCAATCCTGCATGGACCCAAATGTCATGGAGGCCAAGGTGGTTGTGAGCTCTTGTGGGCATGATGGGCCTTTTGGGGCCACTGGGGTGAAGAGGCTCAAGAGCATTGGGCTCATTGAGAGTGTGCCTGGAATGAAGGCCCTTGACATGAACACTGCTGAAGATGCCATTGTGAGGCTCACTAGGGAGATTGTGCCTGGAATGATCGTCACTGGGATGGAAGTTGCTGAGATCGATGGCGCCCCAAGAATGGGTCCAACATTTGGAGCAATGATGATATCAGGGCAGAAGGCAGCCCATCTGGCCTTGAGATCTCTGGGATTTCCCAATGCTGTGGATTACGCAGGAAACATCCACCCTGAGCTTGTCCTAGCTGCTGCAGAATCTGCTGAAACTGCAGATGCTTAA 939 0.5453 MSSSSSSSSGPAPPPYDLRSFKFEPIKESIVSREMTRRYMTDMVTHADTDVVIVGAGSAGLSCAYELSKNPSVKIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIESVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGFPNAVDYAGNIHPELVLAAAESAETADA* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1970 312 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 1 292 IPR027495 GO:0009228
Dod03g1970 312 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 28 282 IPR002922 -
Dod03g1970 312 Gene3D - 48 283 IPR036188 -
Dod03g1970 312 Gene3D - 17 47 - -
Dod03g1970 312 SUPERFAMILY FAD/NAD(P)-binding domain 12 276 IPR036188 -
Dod03g1970 312 PANTHER THIAMINE THIAZOLE SYNTHASE 5 312 - -
Dod03g1970 312 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 5 312 - -
Dod03g1970 312 Pfam Thi4 family 32 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1970 Dod-Chr3 44377541 44384165 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1970 K03146 - gmx:547462 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1970 03 44377541 44384165 Dod03g1970 03 44377541 44384165 ECH