Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1967 ATGCCTCCGGTTGGTCCTCGATCCGGCGATGCCATCTTCGCTAACATTGAGCGCGTTAACGCGGAGCTTTTTACTCTGACGTATGGCGCGATTGTGCGGCAGTTGCTAACGGATCTGGAAGAGGTTGAGGAGGTGAACAAGCAGCTTGATCAAATGGGTTATAATATTGGAATCCGTTTGATTGACGAGTTTTTGGCTAAATCTAATGTCTCAAGGTGTGTCGATTTCAGAGAGACTACTGATGTAATTGCTAAGGTTGGTTTTAAAATGTTCCTTGGTGTTACTGCCTCTGTGACCAATTGGGACGCTGATGGGACATGTTGTAGTATTGTCTTGGAGGATAATCCTTTGGTAGACTTTGTTGAGCTTCCTGACACATGTCAAGGTCTGTACTATTGCAACATCTTAAGTGGTGTCATTAGAGGAGCGTTAGAGATGGTAAGTTTCTGCTGCTATTACAACATCTGA 468 0.4444 MPPVGPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSFCCYYNI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1967 155 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 1 149 IPR016721 GO:0030008|GO:0048193
Dod03g1967 155 Gene3D Trafficking protein particle complex subunit 3 5 155 - -
Dod03g1967 155 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 18 151 IPR024096 -
Dod03g1967 155 Coils Coil 32 52 - -
Dod03g1967 155 CDD TRAPPC3_bet3 20 147 IPR016721 GO:0030008|GO:0048193
Dod03g1967 155 Pfam Transport protein particle (TRAPP) component 24 151 IPR007194 -
Dod03g1967 155 PIRSF TRAPP_1_Bet3 4 155 IPR016721 GO:0030008|GO:0048193
Dod03g1967 155 PANTHER PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1967 Dod-Chr3 44200630 44214006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1967 K20302 - fve:101297811 293.123