Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1950 ATGCAGCTGCAGATATCACCAAGTTTAAGGCATGTCACACTGCTTCCCACAAAAGGGTTGAAAGAATTTGTCAAAGTGAAGGTTGCATCAAGGAGGCTTTCTTACAGGGTGCTCTTCTATGCACTCTTGTTCTTCACATTTCTTCTTCGGTTTGTGTTTGTTTTGACAGCAGTGGATAGCATTGATGGAGAAAACAAGTGCTCTTCCATAGGTTGCCTGGGAGAAAAACTGAAGCCAAAGATTTTGGGAAGAAGTCTTGAATCAACTGTCCCGGAAGTGATATACGAAATATTAGATCAACCCCTTAGCAAAGATGAACTAGAGGGAAGGTCTGATATCCCACAAACTTTAGAAGAGCTCGTGACTGATTTAAAGGATGGTGGATATGATGCCAAGACATTTGCAATCAAACTTAGAGAAACGGTAACCCTTATGGAACAAAGGACCAGGATGGCCAAAACCCAGGAGTATTTATATCGTCATGTCGCATCAAGCAGCATACCAAAACAGCTTCACTGCCTTGACTTGAAGCTGGCCGATGAGCATGCTAACAATGCAGCAGCACGCCTTCAGCTGCCCTCTGCAGAACTTGTCCCTGCACTGGTTGACAACGCCTGCTTCCACTTTGTCCTTGCCTCTGACAATGTACTGGCTGCCTCTGTGGTTGCAACATCACTTGTCCGCAACAGTTTGCGACCTCAGAAAGTTGTTCTCCACATTATTACAGATAGAAAGACTTATTATCCCATGCAGGCTTGGTTTTCACTGCACCCTCTGTCACCTGCTATTATAGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTGCCTGTTCTAGAAGCAATGGAAAAAGATCAACAGGTGCGGTCGCAGTTTAGGGGAGGTTCATCAGCTATAGTTGCAGATATCTCTGAGAAGCCTTATGTTATTGCAGCAAAGCTGCAAGCACTTAGTCCCAAGTATAATTCAATGATGAACCACATCCGGATACATCTTCCAGAGTTGTTCCCAAGTCTTAACAAGGTGGTATTCCTCGACGATGACATTGTGGTACAAACTGATCTTACAACTCTGTGGGACATTGACCTGAACGGAAAAGTCAACGGAGCAGTAGAAACATGCAATGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAACTATTTGAACTTCTCTCATCCTCTAATTTCCAAAAACTTTGATCCCAATGAATGTGCTTGGGCTTATGGAATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCTATACATACCATTACTGGGTTGAGCAGAATATAAAATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCTCCTGCATTAATTGCATTCCATGGTTATGTCCACACCATCGAACCTTTCTGGCACATGCTGGGATTGGGGTATCAGGAAAATACAAGTTTAGCTGATGCTGAGATTGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCACAACTAAGGCCATTGTGGACAAAGTATATCGACTTTTCAGATAACCTCATCAGGAGCTGTCACATTAAGGCATCGGAACTTTGA 1608 0.4328 MQLQISPSLRHVTLLPTKGLKEFVKVKVASRRLSYRVLFYALLFFTFLLRFVFVLTAVDSIDGENKCSSIGCLGEKLKPKILGRSLESTVPEVIYEILDQPLSKDELEGRSDIPQTLEELVTDLKDGGYDAKTFAIKLRETVTLMEQRTRMAKTQEYLYRHVASSSIPKQLHCLDLKLADEHANNAAARLQLPSAELVPALVDNACFHFVLASDNVLAASVVATSLVRNSLRPQKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQQVRSQFRGGSSAIVADISEKPYVIAAKLQALSPKYNSMMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLTTLWDIDLNGKVNGAVETCNGEDKFVMSKRLKNYLNFSHPLISKNFDPNECAWAYGMNIFDLEAWRKTNISYTYHYWVEQNIKSDLSLWQLGTLPPALIAFHGYVHTIEPFWHMLGLGYQENTSLADAEIAGVIHFNGRAKPWLDIAFPQLRPLWTKYIDFSDNLIRSCHIKASEL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1950 535 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Dod03g1950 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 529 IPR029044 -
Dod03g1950 535 Pfam Glycosyl transferase family 8 209 506 IPR002495 GO:0016757
Dod03g1950 535 CDD GT8_like_1 207 519 - -
Dod03g1950 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Dod03g1950 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 523 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1950 Dod-Chr3 43630167 43634495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1950 1 533 Glycosyltransferase AT5G54690 77.196 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1950 K20867 - gmx:100777811 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1119 10 30505486 30507206 Dod03g1950 03 43630167 43634495 PCT