Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1938 ATGAGGATTTTCATTTTTCTGTACCTCATAGCGCAACTCTTTGTAAGGACAGAATCAATAAGCAGAGCAGATTTTCCAGAAGGTTTTATCTTTGGAACTGCTTCTTCAGCTTACCAGTTTGAGGGAGCTGTTGATGAAGGAAATAAAGGAGATAGCATATGGGATACTTTCTCAAGGATACCAGGGAGAATTGTGGATTTCAGTAATGCAGACATGGCTGTGGATCAGTATCACCGATTTCAGAATGATATAGACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATATCATGGCCAAGAATATTCCCAAATGGAACAGGGGAAGCCAATTCAGAGGGAATAAAGTATTACAACAGCCTCATTGATGCTTTACTGGAGAAAGGAATCCAGCCTTTTGTAACCCTATATCATTGGGATCTTCCACAGATGCTTGAAGATGAATATGAAGGATGGTTAAGCACACAAATCATAAAAGATTTCGAGCATTATGCCTATACCTGCTTCCAAGCTTTTGGCGACAGAGTTAAGCACTGGATTACCTTCAATGAACCTCATAACTTCGCGCTCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCTTTCTGGGTCATCTTTTGTGTAAGAAGGGAAAATCATCAACTGAACCATACATTGTTGCTCACAACATTCTCCTATCTCATGCTGCTGCCTATCACAGTTATCAACAGCATTTTAAGGAAACACAAGAAGGTCAAATAGGGATAGCACTGGATGCTGTTTGGTATGAACCCATAACCGATCTTGATGAAGACAAGGATGCAGCAGCAAGAGCTATGGACTTCACACTTGGATGGTTCCTTGACCCGCTTTTCTTTGGAGAATATCCTCTCTCAATGCAAAAGCTTGTAGCTGAGAGGTTACCCAAGATTTCTGATGCAACCTCAGACTTTCTTGTGGGGTCATTGGATTTTATTGGCATAAATCACTACACCTCTATATATACTCGTAATGACAGGACGCGGATTCATAGACTGATTATGCAGGATGCTACATCTGATGCTGCTGTCATCACAACCGCATACCGAAAAGGAGCTGTAATTGGAGAAAGGGCAGCTTCACGCTGGCTGCACATAGTCCCATGGGGCATCCGAAAGTTGGTGAAATATGTGAAAAGAAAATATGGTAACACCTCCATAATTATAACAGAAAATGGTGAGTAG 1218 0.4122 MRIFIFLYLIAQLFVRTESISRADFPEGFIFGTASSAYQFEGAVDEGNKGDSIWDTFSRIPGRIVDFSNADMAVDQYHRFQNDIDLMKDLGMDSYRFSISWPRIFPNGTGEANSEGIKYYNSLIDALLEKGIQPFVTLYHWDLPQMLEDEYEGWLSTQIIKDFEHYAYTCFQAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSFLGHLLCKKGKSSTEPYIVAHNILLSHAAAYHSYQQHFKETQEGQIGIALDAVWYEPITDLDEDKDAAARAMDFTLGWFLDPLFFGEYPLSMQKLVAERLPKISDATSDFLVGSLDFIGINHYTSIYTRNDRTRIHRLIMQDATSDAAVITTAYRKGAVIGERAASRWLHIVPWGIRKLVKYVKRKYGNTSIIITENGE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1938 405 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 29 43 IPR033132 -
Dod03g1938 405 PANTHER GLYCOSYL HYDROLASE 10 404 IPR001360 GO:0004553|GO:0005975
Dod03g1938 405 Gene3D Glycosidases 11 405 - -
Dod03g1938 405 Pfam Glycosyl hydrolase family 1 23 404 IPR001360 GO:0004553|GO:0005975
Dod03g1938 405 SUPERFAMILY (Trans)glycosidases 11 404 IPR017853 -
Dod03g1938 405 PANTHER BETA-GLUCOSIDASE 41-RELATED 10 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1938 Dod-Chr3 43072185 43074930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1938 15 404 Glycoside Hydrolase AT5G54570 73.657 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1938 K01188 - gmx:100783543 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1938 03 43072185 43074930 Dod03g1938 03 43072185 43074930 ECH