Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1892 ATGTGCGTCATATCCTGCGCCGCATCCGCTTATCCTGCGCTTCCTACTCGTGCTTTCGCTCCATTGGCCACCGTTCGCTCGGTCTCTAGGGTCTCAGTTCCTGCCGCTGCTAACGACATCCATCATTCCATTGTCAACCCCTTCGTCCCAGAGGTGGTGGAAGCAGTGGATGCCTTGCATTCAGAGTTCAGGGCTGTGGATAATTTGGTTGCATTTAATACCACCCGTGTCCTTAAAGCTTTCCAGAATTCTAGAGTTGGATCTCATCACTTTGGTGGTTGCACTGGTTATGGTCATGATGAAGCTGGGGGGCGAGAGGCTCTTGACCAGGCTTTTGCAGAAATTGTTGGGGCTGAATCAGCTATTGTTCGTTCACAGTTCTTCTCAGGTACTCATGCTATCACATGCGCTTTATTTGCACTGCTGAGGCCAGGGGATGAGCTCTTGGCAGTTGCTGGTGCTCCCTATGACACAATGGAGGAAGTAATTGGGAAAAGAGACACTGGTGGACTTGGTTCCCTCCAAGATTTTGGGGTGAAGTACCGAGAAGTTCCGCTCGCTGAGGATGGTGGACTTGATTGGAATGCACTGGTTGTTGCTGTCAAACCTGAAACAAAATGTGCACTTATACAAAGGTCATGTGGTTATTCATGGCGTCGGAGTTTGAGTGTTAATGAAATAGGAAGCGCAATAAAAATAATCAAAATGCAAAATCCTAACTGCTCAGTCATGGTGGACAATTGCTATGGAGAATTTGTTGAAAGCATTGAACCTCCCATGGTGGGTGCAGATTTGATCGCTGGCAGTTTGATAAAGAATCCCGGTGGAACAATTGCACCATGTGGTGGATATGTTGCTGGGAGAAAAAAATGGGTTGAAGCAGCTGCAGCCCGTCTTTCTGCACCTGGGCTTGGTGTGGATTGTGGCTCAACCCCTGGTGATATCATGAGAGCCTTTTTCCAGGGATTATTTCTTTCACCCCAAATGGTTGGGGAAGCAATCAAGGGTTCGTTCTTGGTTGCTGAAGTTTTAGCATCTAAAGGCTATAAAGTGCAGCCACTCCCTCGAGTACCCCGCTCTGATATGGTTCAGGCCGTACAACTTGGAAGCCGTGAGCTTCTCCTTGCTTTCTGTGAGGCTGTTCAGAGAAGCTCTCCTGTAGGTTCATATTCCAAACCAGTTGCCGGTAACACTCCTGGATATGCATCAGAGGTAATATTTGCTGATGGAACCTTTATTGATGGGAGTACTAGTGAGCTTTCATGTGATGGACCTCTTAGAGAGCCATTTGCTGTATTCTGTCAAGGTGGCACCCATTGGACTCAATGGGGACTAGTCCTAGGAGAAGTTCTGAAATTTGTATGA 1365 0.4762 MCVISCAASAYPALPTRAFAPLATVRSVSRVSVPAAANDIHHSIVNPFVPEVVEAVDALHSEFRAVDNLVAFNTTRVLKAFQNSRVGSHHFGGCTGYGHDEAGGREALDQAFAEIVGAESAIVRSQFFSGTHAITCALFALLRPGDELLAVAGAPYDTMEEVIGKRDTGGLGSLQDFGVKYREVPLAEDGGLDWNALVVAVKPETKCALIQRSCGYSWRRSLSVNEIGSAIKIIKMQNPNCSVMVDNCYGEFVESIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGRKKWVEAAAARLSAPGLGVDCGSTPGDIMRAFFQGLFLSPQMVGEAIKGSFLVAEVLASKGYKVQPLPRVPRSDMVQAVQLGSRELLLAFCEAVQRSSPVGSYSKPVAGNTPGYASEVIFADGTFIDGSTSELSCDGPLREPFAVFCQGGTHWTQWGLVLGEVLKFV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1892 454 SUPERFAMILY PLP-dependent transferases 75 442 IPR015424 -
Dod03g1892 454 Gene3D - 48 99 - -
Dod03g1892 454 Gene3D - 309 454 - -
Dod03g1892 454 Pfam Methionine gamma-lyase 54 451 IPR009651 -
Dod03g1892 454 Gene3D - 100 308 IPR015421 GO:0003824
Dod03g1892 454 PANTHER - 1 452 IPR009651 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1892 - - gmx:100809166 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1892 03 39939912 39965869 Dod03g1892 03 39939912 39965869 ECH