Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1852 ATGCTCCCTCTTCCGCTTCAGCTTCTTCACCGTCACCACCACCAGCATCCTTCTCTTCCTAACTTGATAATCACCAAACCCTTCTCAACACCCATTACTTCTCTTCCTCAATCCGTGCCTCGAACCGTTTCCAGGCTGAGAGCGAGTTGTTCCGCTCGCCCCTGCTCGGGTTCCCCGGTGTTCTCGTCGTCGAAGGATGAGTTCGAGGTGGAGCTGGGGCGGCTGCTGGCGCTGTTGCCGGAAGAGATGCGGCGGCGGGTCAGTGACCACTCCGAGCTGCACCATTTGATCGAGGTGGTCATGGATTTGGGTCGTAAACCACTGGCTAGGTTCCCGTCCGGCGATTTTGTGATATCGGAGCATCCGATAACGGTCCAAGATATCGAGCACGCCACGGCTCAGGTTGGTGACTTTGCTGTTGACAATCGAGCAGGAATCAGCAGGACATTACATCGGATTAGTGCTATAAAAAACCGCAAGGGTGCAATTATTGGTCTAACTTGTCGAGTTGGCAGGGCACTTTTTGGAAGTGCTAAGTTGTTGCGAGATTTGGTTCAAGATGGGGCTTCTTTGCTGCTCATTGGGCCTCCAGGGGTAGGAAAAACTACAATTATTAGGGAAATAGCTCGGATGCTGGCAAATGATTATAAGAAGCGCGTTATGATTGTTGACACCTCAAATGAGATTGGTGGTGATGGTGATATACCTCACTCTGGAATAGGCAGTGCTCGACGTATGCAAGTCGCCAACTCTGAGATGCAACATAAGGTATTGATAGAAGCAGTTGAAAACCACATGCCACAAGTGATTGTAATAGATGAAATCGGTACGAAACTTGAAGCAATGGCTGCTAGTACTATTGCACAGCGTGGAATCCAGCTTGTTGCTACTGCTCATGGAGTCACAATTGAGAACCTAATAATGAATCCTTCATTAGAGATGCTTGTTGGAGGAATACAGAGCGTCACACTGGGGGATGAAGAGGCCAGCCGCAGGGGTGTTCAAAAGACTGTACTGGAGAGGAAAGGCCCATCAACGTTTAGTTGTGGAGTGGAGATTATTTCGAAGACAGAGTTGCGGATTCATCGTAGCCTGGAAGCAACTGTGGATGCTATTCTTTCTGGTCGTCTTCCAAATACTGAAGTGCGCAAAATGAAGTCTCAAGAACAGGAAGAGGTTTCACAGGAGGGGCCTGTTATTTACAGTTCTGAAAAGGATAGCGAAATTATGTATGACGATGCTCTAGAGTTGGCTGATGACCAAACCAACCAGAATAAATCATCTTTGAAGTTGCCTATTGATATGGTACAGGATTCCTTGGATCACAAAGTGCCACTTCGCCTGTTTTGTTATGGGATTTTAGAGGCCACTGTTATGCAAGGGATTAAACAGTCGAAAATGAATGATGCTGCGATTCAGTTGACTGATAATATTAGTGAAGCAAATGCTTTACTTGCCTTGCAAGCAAAGCTTAGGAAGAACCCAAGGATCCAAGCTGCTGCTAAATCTCATGATATTCCTATTTATGTAACAAAGACGAGTTCATTGGAGCAAGTAACCAAGTCCATACGTGCATTAGTAAGTGATCATGAAGATGGTTTAAAGGATTTTGTGTTGGTGGATAAGATAAAACTATCAGAGAAGGTTGATGCTTTGGAGGAGGCAAGAATGGCTATCGAGCATATAGTAATTCCGAAGGGAGAACCTGTAGATCTACTCCCAAGGTCATCTCACATATTGTCTCTTCAGCTGGACCTTGTTCGTAAGTACCAACTAGAAGCAAGGAGAATCGGTGGAGAGCCAAATGTGCATCTGCGGATCCTTCCATCCCATTATCGGACGGATGATGAAGTAAAAACTAGTGAAACTTCTGAGCTTGATGCTGGATTTGATGATTTTGCCTCCTCCAATGGCAGTGCCAATGGCCCAACCTACAGCTTGGACAGATTGCCCTTGCTCCCTGAGTAA 1968 0.4634 MLPLPLQLLHRHHHQHPSLPNLIITKPFSTPITSLPQSVPRTVSRLRASCSARPCSGSPVFSSSKDEFEVELGRLLALLPEEMRRRVSDHSELHHLIEVVMDLGRKPLARFPSGDFVISEHPITVQDIEHATAQVGDFAVDNRAGISRTLHRISAIKNRKGAIIGLTCRVGRALFGSAKLLRDLVQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHSGIGSARRMQVANSEMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEATVDAILSGRLPNTEVRKMKSQEQEEVSQEGPVIYSSEKDSEIMYDDALELADDQTNQNKSSLKLPIDMVQDSLDHKVPLRLFCYGILEATVMQGIKQSKMNDAAIQLTDNISEANALLALQAKLRKNPRIQAAAKSHDIPIYVTKTSSLEQVTKSIRALVSDHEDGLKDFVLVDKIKLSEKVDALEEARMAIEHIVIPKGEPVDLLPRSSHILSLQLDLVRKYQLEARRIGGEPNVHLRILPSHYRTDDEVKTSETSELDAGFDDFASSNGSANGPTYSLDRLPLLPE* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1852 655 CDD R3H_AAA 550 609 IPR034081 -
Dod03g1852 655 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 554 572 - -
Dod03g1852 655 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 195 214 - -
Dod03g1852 655 PANTHER KINASE-RELATED 50 613 - -
Dod03g1852 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 330 IPR027417 -
Dod03g1852 655 SMART AAA_5 187 318 IPR003593 -
Dod03g1852 655 Pfam Sporulation stage III, protein AA 166 317 IPR045735 -
Dod03g1852 655 CDD AAA 170 277 - -
Dod03g1852 655 Gene3D - 176 330 IPR027417 -
Dod03g1852 655 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 50 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1852 Dod-Chr3 35575614 35626446 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1852 - - aprc:113864776 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1852 03 35575614 35626446 Dod03g1852 03 35575614 35626446 ECH