Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1837 ATGGCCAACAGTAACCTCCCTCGAAGAATCATAAAGGAAACGCAGCGTTTGCTCAGTGAGCCAGCACCTGGAATTAGTGCTTCCCCTTCGGAAGACAACATGCGATATTTCAATGTCATGATCCTTGGGCCAACCCAGTCACCTTACGAAGGTGGAGTTTTCAAGCTAGAACTATTTTTGCCAGAAGAGTATCCAATGGCTGCTCCAAAGGTTAGGTTTTTGACAAAAATATATCATCCGAACATTGATAAGCTTGGCAGGATATGTCTTGATATTCTAAAAGATAAGTGGAGTCCTGCCCTTCAGATACGCACTGTTCTTCTGAGCATTCAAGCTCTTTTGAGTGCACCAAACCCAGATGATCCGCTTTCTGAGAACATTGCCAAGCATTGGAAATCTAATGAGGCCGAGGCTGTTGAAACAGCGAACGAATGGACGCGATTATATGCTAGTGGTGCCTGA 462 0.4481 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETANEWTRLYASGA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1837 153 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 78 93 IPR023313 -
Dod03g1837 153 SMART ubc_7 8 151 - -
Dod03g1837 153 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 35 2 150 - -
Dod03g1837 153 Pfam Ubiquitin-conjugating enzyme 9 144 IPR000608 -
Dod03g1837 153 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 151 IPR000608 -
Dod03g1837 153 SUPERFAMILY UBC-like 7 151 IPR016135 -
Dod03g1837 153 Gene3D Ubiquitin Conjugating Enzyme 1 152 IPR016135 -
Dod03g1837 153 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 150 - -
Dod03g1837 153 CDD UBCc 7 146 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1837 Dod-Chr3 31677233 31683586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1837 8 118 Miscellaneous Gene Families AT3G17000 29.060 1.48e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1837 K10580 - zju:107432499 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1837 03 31677233 31683586 Dod03g1837 03 31677233 31683586 ECH