Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1766 ATGGCTGGTGGGTCTTTTACAGCAGGCGTTGTGGGCAAGGAAAGGGCAGAGCAGTACAAGGGAAGAGTCACCGCCTATGTCATCATCGCTTGCATTGTTGCTGCCACTGGCGGGTCTCTCTTTGGCTATGACATTGGGATTTCAGGCGGGGTAACTTCCATGGATGACTTTCTTCAAGATTTCTTCCCCAAAGTATATAAACATAAAAAGCATGCACATGAAAACAACTACTGCAAGTATGATAATCAGGGCCTCGCCGCATTTACCTCTTCTCTGTACATTGCTGGTTTGGTTGCTTCCCTAATGGCATCTCCCGTTACAAGGAAGTATGGACGTCGGGCAAGTATCATAGGTGGAGGGGTCAGCTTTCTTATTGGATCAGCTCTGAATGCTTCAGCTGTTAACCTGGCAATGCTGATCTTAGGTCGGGTTATGCTTGGTGTTGGCATTGGATTTGGAAATCAGGCTATTCCGCTTTATTTGTCAGAGATGGCGCCAACCCACCTTAGAGGAGGCCTGAACATGTTGTTTCAAGTAGCAACGACTTTTGGGATCTTTACTGCCAATATGGTCAATTATGGAACCCAGAGGATTAAACCATGGGGATGGAGGCTGTCCCTAGGCCTGGCTGCAGTACCAGCTCTTTTGATGACTGTAGGAGGGATATTTCTTCCTGAGACCCCAAATAGCTTAATAGAACGAGGATCCAGAGAAAAAGGAAGGAAGCTCTTGGAAAAAATCAGAGGAACAAACGAAGTGGACGCAGAGTTCGAAGATATGATCGATGCAAGCGAGCTGGCAAACTCCATAAAGCACCCATTCCGCAACATCCTTGAGAAAAAGAACAGGCCAGAGTTGGTAATGGCAATCTTCATGCCTACCTTCCAGATCCTGACAGGCATAAATTCCATTCTCTTCTATGCTCCAGTGCTTTTTCAAAGCATGGGATTTGGAGGAGATGCATCCCTCTACTCCTCTGCTTTGACTGGTGGAGTTCTTGCTTTCTCAACATTCATTTCCATTGCAACAGTAGACAAATTGGGCAGGAGAGCTCTTCTTATCAGTGGTGGAATACAAATGATCACATGCCAGGTTATAGTAGCCATAATTTTGGGGATCAAGTTTGGAGAGAACCAAGAATTGTCCAAGGGCTATTCAATATTGGTTGTTGTTGTGATTTGCCTCTTTGTTGTAGCTTTCGGATGGTCATGGGGCCCACTTGGGTGGACGGTCCCAAGTGAGATATTTCCATTAGAAATCCGGTCAGCCGGGCAAAGTATCACGGTTGCTGTAAACCTTCTGTTCACTTTCATAATTGCCCAGGCCTTCCTTGCCCTTCTCTGCTCCTTCAAGTTCGGGATATTCCTCTTCTTTGCCGGGTGGATTACCATCATGACCATATTTGTTTTTGTGTTCCTACCTGAAACCAAGGGAATTCCCATTGAGGAGATGGCATTTATGTGGAGGAAGCACTGGTTCTGGAAAAGAGTACTGCCCGAGACAACTAATGGTAGTTTAACAAGTGCCAAGGACTCCGGTACAATTTGA 1548 0.4599 MAGGSFTAGVVGKERAEQYKGRVTAYVIIACIVAATGGSLFGYDIGISGGVTSMDDFLQDFFPKVYKHKKHAHENNYCKYDNQGLAAFTSSLYIAGLVASLMASPVTRKYGRRASIIGGGVSFLIGSALNASAVNLAMLILGRVMLGVGIGFGNQAIPLYLSEMAPTHLRGGLNMLFQVATTFGIFTANMVNYGTQRIKPWGWRLSLGLAAVPALLMTVGGIFLPETPNSLIERGSREKGRKLLEKIRGTNEVDAEFEDMIDASELANSIKHPFRNILEKKNRPELVMAIFMPTFQILTGINSILFYAPVLFQSMGFGGDASLYSSALTGGVLAFSTFISIATVDKLGRRALLISGGIQMITCQVIVAIILGIKFGENQELSKGYSILVVVVICLFVVAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIIAQAFLALLCSFKFGIFLFFAGWITIMTIFVFVFLPETKGIPIEEMAFMWRKHWFWKRVLPETTNGSLTSAKDSGTI* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1766 515 CDD MFS_STP 33 475 IPR044778 GO:0015145|GO:0015749
Dod03g1766 515 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Dod03g1766 515 PANTHER - 1 503 - -
Dod03g1766 515 SUPERFAMILY MFS general substrate transporter 32 484 IPR036259 -
Dod03g1766 515 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g1766 515 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g1766 515 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1766 515 Pfam Sugar (and other) transporter 31 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g1766 515 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1766 515 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1766 515 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1766 515 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1766 515 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1766 515 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 503 IPR045262 GO:0015144
Dod03g1766 515 Gene3D MFS general substrate transporter like domains 19 491 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1766 Dod-Chr3 26261690 26266142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1766 1 503 Organic Solute Cotransporters AT4G02050 80.517 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1766 K24193 - gmx:100820434 915.99