Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1734 ATGGCAAAACTGAAGATCGGAGGGACGTGGGCAGGGGTGCTGGAAGGCGTCGACCTCGACGCCTGGACGGTGCCGAAGCTGCGCGAAGAGGTTGCCGGGCGATCTAACTGCCCCCCTGACTCAATCAGCCTCATCTGCGCCGGCAAGATTCTCAAGGACGCCGACGCCGACCACCCTAACAACTTGGCCCAGTTGGGCGTCAAGAACAACTCCAAGATCCTCGCCACTCGCGTCTCCCCTCAGGAAGGCCACTCCCTCAAACAAGAGATCATGGCCGAAGAAGAACGCTCTCGCAGGCTTACCCGGCTCAGGGCAGCTGTAACTGCACTGGCTGAAAGGCATGCAGATGGTTCATTACCTGTTGAAGACTTCAACATAGAAGTTGAAGATCAAAGTGGACAGAAAGTACATCTAGGTTCTGAGACTGATCAGAGGGCAGTAATGATGGGACTTATACTTCATGCAAAGGGGAAGGGTCTTATTAGACAGGGAAATTACAAAGATGCCCTAGAAGTACTTGGCATGGGCGAGGAGGCATTCTCACTTTGTGATCCAAAAGTACTTGAGCTTATTGACAATGTTCCAATCCTGCAAATAGACATGGTGTGGTGCTACTTTATGATACGAGACATAAGATGGCTCTCAGACGCAGGAAAGCGTCTGGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTTTCCGCCTCAGACTTTTACAAGGAGGTTGCTATCCAGAACAAGCACTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATATCATAGTGGCCTATTGGAGAAATCAAGTAAAGCATTACTTTCTGCAAAAGCAAAATTTGTCCAGCTGCAAATCTCAGATGAAGCCTTGACACTTGTAATGGGCATGGGCTACAAAGAACGTGATGCAAAGAGAGCATTGCGAATGAACAATCAAGATGTGGGAGGTGCCATTGATTTCCTTCTTGTGGAGACGGCGAAGAAAATGCAAAAACGAGAGGAAGACATCCAGAGAAGAAATGAAATTAGGGAGCAAAAGCGCTATGGGATGACACCCTCAAAGAAAGCTGTGGATCTAGATAGATTAAAGGAATTGGTCTCTATTGGGTTTGACAAGGAGCTTGCTGCTGAAGCCCTTCGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACAAATCCGGAAATAAGTTCTGCTTTACAGGTTCATATTGAGTCGAGGAAAAGGAAGAGGCAGAAAAAGGCAACAGATTCTGCAATCGAAAAGGTTGTAAGCATGGGCTTTGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCCGGTGGTACTATAGAACAAGTAATGGAAAGACTGACAGCGCAACCTGACGCCAACCCCACATCAACTGCTGAAGCAAATTCAACGGGTGCTGCCCTTAGCAGTGCAAGTTCTTCTGCTCCTTTACCACCGGACAATGTTGTTTCTGATATTCTGGACGAAATGAACGATGAAGGTGCATCAGATCTCAACAAGGCAGAGGAGCGCGATGCGGAGATGGAAGACGAGCTCTCTGCTGATATAGCAAAAACAGATGCCCTAGCTGACTATGACATTGAAGTTAACATAGAAGGGGAAGCCATAACTGAGTACCTGGCTTTGCTAGAGGCAGCAGGCAGCAGTGGGAAAATGGTTGCTTCCCAGTGA 1698 0.4788 MAKLKIGGTWAGVLEGVDLDAWTVPKLREEVAGRSNCPPDSISLICAGKILKDADADHPNNLAQLGVKNNSKILATRVSPQEGHSLKQEIMAEEERSRRLTRLRAAVTALAERHADGSLPVEDFNIEVEDQSGQKVHLGSETDQRAVMMGLILHAKGKGLIRQGNYKDALEVLGMGEEAFSLCDPKVLELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEMARAGIERAHGKDSFRLRLLQGGCYPEQALHLRLELLEGVVAYHSGLLEKSSKALLSAKAKFVQLQISDEALTLVMGMGYKERDAKRALRMNNQDVGGAIDFLLVETAKKMQKREEDIQRRNEIREQKRYGMTPSKKAVDLDRLKELVSIGFDKELAAEALRRNENDTQKALDDLTNPEISSALQVHIESRKRKRQKKATDSAIEKVVSMGFERSRVVAAFEAGGTIEQVMERLTAQPDANPTSTAEANSTGAALSSASSSAPLPPDNVVSDILDEMNDEGASDLNKAEERDAEMEDELSADIAKTDALADYDIEVNIEGEAITEYLALLEAAGSSGKMVASQ* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1734 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 288 328 IPR015940 -
Dod03g1734 565 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 555 IPR039749 -
Dod03g1734 565 SUPERFAMILY UBA-like 265 326 IPR009060 GO:0005515
Dod03g1734 565 Coils Coil 500 520 - -
Dod03g1734 565 Coils Coil 330 350 - -
Dod03g1734 565 CDD UBA 366 395 - -
Dod03g1734 565 Gene3D - 290 328 - -
Dod03g1734 565 Gene3D - 363 400 - -
Dod03g1734 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 360 400 IPR015940 -
Dod03g1734 565 ProSiteProfiles Ubiquitin domain profile. 23 73 IPR000626 GO:0005515
Dod03g1734 565 SMART uba_6 362 399 IPR015940 -
Dod03g1734 565 SMART uba_6 422 458 IPR015940 -
Dod03g1734 565 SMART uba_6 290 327 IPR015940 -
Dod03g1734 565 MobiDBLite consensus disorder prediction 460 488 - -
Dod03g1734 565 Gene3D - 420 485 - -
Dod03g1734 565 SUPERFAMILY Ubiquitin-like 22 75 IPR029071 -
Dod03g1734 565 MobiDBLite consensus disorder prediction 460 494 - -
Dod03g1734 565 SUPERFAMILY UBA-like 359 400 IPR009060 GO:0005515
Dod03g1734 565 Gene3D - 17 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1734 Dod-Chr3 25289368 25305718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1734 - - aip:107630532 847.04