Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1708 ATGGAAGGAGGAGTACCAGAAGCTGATGTCTCTGCTTTCAGAGAATGTTTGTCTCTGTCATGGAAGAATCCTTATGTCCTTCGCCTTGCTTTCTCTGCTGGAATTGGTGGCCTTCTCTTTGGTTATGACACTGGAGTCATATCTGGGGCTCTTTTATATATCAGAGATGATTTCAAAGCTGTGGATAGAAAGACTTGGCTGCAGGAAGCCATAGTGAGTACGGCACTTGCTGGAGCAATCATAGGGGCTTCAGTTGGAGGATGGATCAACGATCGATTTGGAAGGAGAAAAGCAATCATACTTGCAGACACACTCTTCTTCATTGGGTCTGTTGTCATGGCTGCTGCCCCCAATCCAGCTATTCTCATTGTTGGTCGAGTTTTTGTTGGGCTTGGTGTTGGAATGGCCTCAATGGCATCCCCATTGTACATTTCAGAGGCTTCCCCCACCAGAGTTCGAGGGGCCTTAGTTAGCCTCAATGGATTTCTCATCACCGGAGGACAATTCCTATCCTACCTGATCAACTTGGCCTTCACAAATGCACCGGGGACATGGAGGTGGATGTTAGGAGTTGCCGTAGCACCGGCTTTGACACAAATCGTTCTGATGATTATGCTCCCAGAATCGCCTCGTTGGCTGTTCCGAAAGGGAAAAGAAGAAGAAGCTAAAGAAATTCTAAGGAGGATCTACCCTCCCCAGGATGTTCAAGATGAAATTAATGCTCTCAAGGAGTCAGTTGAAATGGAAATCCAGGAAGCATCAGCTTCAGATAAGGTCAGCATAGACAAATTGCTCAAGACTAAAACTGTGAGAAGAGGCCTCTATGCTGGGATGGGCCTTCAAATTTTCCAGCAGTTTGTAGGCATCAACACTGTCATGTACTACAGCCCCACCATTGTTCAGTTGGCTGGTTTTGCATCCAATAGGGTAGCACTGCTTCTGTCTCTTGTCACTGCTGGCCTGAATGCAATTGGTTCAATTATGAGCATATACTTCATTGATAAGACTGGTAGAAAAAAGCTTCTGCTGTTCAGTTTGTCTGGTGTTGTGGTCTCCCTGGTTGTTTTAACTGTTGTGTTCCATGAAACCACAACTCACTCTCCCATGGTTAGTGCAATCGAAACCTCTCACTTCAACAACACATGCACCGATTACAGCACAGCTTTGAACCCTGGTGCTTGGGATTGTATGACCTGCCTGAAGGCTTCTCCAGGGTGTGGCTTTTGTGCTTCTGCATCTAACAAGCTCTTCCCTGGGGCGTGCTTGATCTCCAATGACACAACAGAAGATCAGTGCCAAAAAGAACACAGGCTATGGTACACTAGGGGGTGTCCTAGCAAATATGGCTGGCTTGCACTAATTGGCCTGGCACTCTACATCATATTCTTCTCACCAGGGATGGGAACTGTTCCATGGGTTGTCAACTCTGAGATATATCCTTTAAGATACAGAGGAATTTGTGGAGGGATGGCATCTACCTCAAATTGGGTCTCAAATCTCATTGTTGCACAGTCCTTCCTATCCTTGACAGATGCTATTGGGACTTCATACACATTCATGATATTTATATTCATCACCATTGCGGCCATTATCTTTGTCATTATTTTTGTACCAGAAACCAAAGGGCTTCCAATTGAGGAGGTGGAGAAAATGCTGGAAGGAAGGTCTCTGAACTTCAAGTTTTGGCAGAGAAGTTCTGACCCTGGTGATGCACCTACAAAAAAGACTCAGTATGTTTGA 1740 0.4552 MEGGVPEADVSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRKTWLQEAIVSTALAGAIIGASVGGWINDRFGRRKAIILADTLFFIGSVVMAAAPNPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYLINLAFTNAPGTWRWMLGVAVAPALTQIVLMIMLPESPRWLFRKGKEEEAKEILRRIYPPQDVQDEINALKESVEMEIQEASASDKVSIDKLLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRVALLLSLVTAGLNAIGSIMSIYFIDKTGRKKLLLFSLSGVVVSLVVLTVVFHETTTHSPMVSAIETSHFNNTCTDYSTALNPGAWDCMTCLKASPGCGFCASASNKLFPGACLISNDTTEDQCQKEHRLWYTRGCPSKYGWLALIGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTDAIGTSYTFMIFIFITIAAIIFVIIFVPETKGLPIEEVEKMLEGRSLNFKFWQRSSDPGDAPTKKTQYV* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1708 579 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 370 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1708 579 Pfam Sugar (and other) transporter 448 551 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g1708 579 Pfam Sugar (and other) transporter 30 365 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g1708 579 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 541 IPR020846 GO:0022857
Dod03g1708 579 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1708 579 PRINTS Sugar transporter signature 476 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1708 579 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1708 579 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1708 579 PRINTS Sugar transporter signature 453 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g1708 579 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 568 - -
Dod03g1708 579 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g1708 579 CDD MFS_HMIT_like 32 519 - -
Dod03g1708 579 Gene3D MFS general substrate transporter like domains 20 398 IPR036259 -
Dod03g1708 579 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 568 - -
Dod03g1708 579 SUPERFAMILY MFS general substrate transporter 19 550 IPR036259 -
Dod03g1708 579 Gene3D MFS general substrate transporter like domains 427 559 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1708 Dod-Chr3 24435660 24441056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1708 1 567 Organic Solute Cotransporters AT1G30220 72.680 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1708 K08150 - gmx:100783605 1002.28