Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1697 ATGGATCACCACGAGGACGAATGCCGCATCGGAGGTGAAAGTAACAGCAAACACGATGATGAGGAAGCTGTTGCTCGGCTTGAGGAATTAAAAAAATCGATTGAGGCAAAAATTGCTTTACGTCAAAGCAATTTGAATCCCGAAAGGCCTGATTCAGGATTTTTAAGGACGCTGGATTCCAGCATTAAGCGCAACACTGCAGTCATTAAGAAATTGAAGCAGATTAATGAAGAGCAGCGTGAAGCGCTGATGGATGAGTTGAGGAGTGTCAACTTAAGCAAATTTGTCAGTGAAGCTGTGACAGCTATATGTGATGCCAAGCTTAGAAGTTCAGATATCCAAGCAGCAGTTCAGATCTGCTCTTTGCTTCATCAAAGGTACAGGGACTTTGCGCCAAGCCTGATTCAAGGGCTTCTCAAAGTTTTCTCTCCTGGAAAACCTGGAGATGAATCAGATGCAGATAAAAACTTGAAGGCGATGAAAAAGCGCAGTACACTGAAACTTCTCTTGGAACTTTATTTTGTTGGAGTTATTGAAGATGGTAGCATTTTTATCAATATTATAAAAGATCTTACCAGCATGGAGCAACTAAAAGATCGGGATGCTACACAAACAAGTTTGACTCTTCTTTCTAGCTTTGCTCGACAAGGGAGAATTTTTCTTGGACTTCCTGTTACTGGGCCAGAAATTCATGAAGAGTTTTTTAAAGGCCTCAACATCACGGCAGATCAAAAGAAAGTTTTTAGGAAAGCGTGTTATGCATTCTACGATGCTGCAGCGGAACTACTTCAGTCTGAGCATTCTTCACTTCGACTAATGGAGCATGAAAACTCGAAGATTCTAAATGCAAAAGGAGAGCTCAGTGATGAAAATATTGCTTCATATGAAAAGCTTCGTAAATCCTATGACCATTTATATCGTAATGTCTCATCACTAGCAGAAGCACTTGATATGCAGCCTCCTGTAATGCCAGAGGATGGTCACACAACAAGGGTTTCAAGTGGTGAGGAAGCTATTTCTTCTGCTGCTGGGAAAGATTCTTCTGTTGCTGAACCTGTATGGGATGATGAAGATACAAGGGCTTTCTATGAATGTTTACCTGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGGGAAACAGAGCCAAAAATCAGTGAGCAACCAGTGAAGAATCAAGACCAACCAACTGAAACAGTACCTGAATCTGACAAAGGTCAAGTGATCAATAATGAAAGTGGAGAAGCATTGACAGAATCTAGTGCTTTGCCAGAGGGAGAAAGCATAGAAAAAATAAAGGATAAGGAAGATAAAGAAAAGTCAAAAGAATTGGAAAGAGATAAGGAAAAGGAAAAAGATAACGACAAAAAGGGGGAAAATGAAAAGGACAAACTCAGAAGCCTTGAGGGGACAAATTTGGATGCTTTATTGCAGAGGCTTCCTGGTTGTGTGAGCCGGGACCTTATTGACCAATTGACTGTAGAATTCTGTTATCTAAATTCAAAATCAAATCGAAAAAAGCTTGTGAGGGCTCTGTTCAATGTACCAAGGACATCTCTGGAGCTGCTACCATATTACTCACGTATGGTTGCCACGCTCTCAACTTGTATGAAGGATGTCTCCTCCATTCTCTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAACAAGAAGGACCAGATGAATATTGAGACAAAGATAAGGAACATCAGGTTCATTGGAGAACTTTGCAAGTTCAAAATTGCCCCTGCTGGTCTAGTCTTCAGCTGTTTGAAGGCCTGTTTAGATGATTTTACTCATCACAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTATATCGATCTTCAGAAACTACTATACGCATGGCTAACATGTTAGAGATATTGATGCGCTTGAAAAATGTGAAAAACTTGGATCCCAGGCATAGCACTTTAGTGGAAAATGCATATTACCTTTGTAAGCCACCAGAAAGATCTGCACGAGTTGCTAAAGTTCGTCCACCATTGCATCAGTACATCAGAAAATTACTGTTCTCTGACCTAGATAAGTCTACCATTGAACACGTTCTAAGGCAGCTGCGTAAATTGCCATGGAGTGAATGTGAACCATATCTTTTGAAATGCTTCATGAAGGTCCATAAAGGGAAATATGGTCAGATCCACCTGATTGCCTCTCTTGCTGCTGGTTTAAGTCGCTACCATGATGAGTTTGCAGTAGCTATAGTTGACGAGGTTTTGGAGGAGATTAGAGTTGGGCTGGAATTAAATGACTATGGGATGCAGCAAAGGCGCATTGCCTACATGCGATTCTTAGGGGAGCTTTACAACTATGAGCATGTAGACTCATCTGTTATTTTTGAGACACTATATCTCATTCTTGTCTACGGCCATGGGACACCCGAGCAAGATGTACTGGATCCACCTGAAGATTGTTTTCGTATAAGGTTGATCATTACTCTTCTGGAAACTTGTGGGCATTACTTTGACCGTGGCTCTTCTAAGAGGAAACTGGATCGATTTCTTATACACTTCCAGAGATATACTTTAAGCAAAGGTGCACTGCCCCTGGACATTGAATTTGACTTGCAGGATCTGTTTGCGGACTTGCGCCCCAATATGGTTCGGTACACCTCTCTTGAGGAAGTGAATGCAGCTCTAGTGGAGCTTGAGGAACATGATCGTATAATTTCTGCTGATAAGGCTAGTAGTGAGAAACATTCTGACACAGAGAAGCCTTTAAGTAGAACTAGTTCCAACACTGTAGTAGGCAATGGACAGGGCATTGATAATGGTGCAGAGGAAAATGGAGTGCAAGATGATGTCAATGATAGTGAGACTGATTCAGGGAGTGGCACTATTGATGCGGAGGGACATGATGATGAAGACCTGGATGAGGAGAATCATGATGATGGGTGTGAGACTGAGGATGAAGATGATGATGATGATGGGCCTGGACCTGCATCTGATGAGGAAGATGAAGTCCGTGTGAGACAGAAGGTGACAGAAGTGGACCCTCTGGAGGAAGCCAATTTTGATCAGGAGCTGAAGGCTGTGATGCAGGAGAGCATGGAACAGCGAAGGCAAGAGCTACGAGGCCGTCCTACATTGAACATGATGATTCCCATGAATGTATTTGAGGGATCAACTAGGGATCATCATGGGAGAGGAACGGGTGGTGAAAGCGGTGATGAGGCATTGGATGAGGAGACTGGTGGAAACAGAGAGGTTCAGGTGAAAGTTCTTGTGAAGCGTGGGAACAAGCAACAGACTAAGCAGATGTACATCCCGCAGAATTCATCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCTGAGCTTCAAGAGAAAGAAGACATTAAGAGGCTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTGGGGTCCCAACCGACAAACTGGATGCTGAGTGGAGGTAACAGAGGTAGTGGCCGTGGCAACACTTTGGAGGGAGGCAGTGGTCGGAGTGGTGGATCACGGCATCGGCATCATAATTATACTGGCAGTGGTATCTACTATAGCAGAAGAAAGTGA 3582 0.4283 MDHHEDECRIGGESNSKHDDEEAVARLEELKKSIEAKIALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREALMDELRSVNLSKFVSEAVTAICDAKLRSSDIQAAVQICSLLHQRYRDFAPSLIQGLLKVFSPGKPGDESDADKNLKAMKKRSTLKLLLELYFVGVIEDGSIFINIIKDLTSMEQLKDRDATQTSLTLLSSFARQGRIFLGLPVTGPEIHEEFFKGLNITADQKKVFRKACYAFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDHLYRNVSSLAEALDMQPPVMPEDGHTTRVSSGEEAISSAAGKDSSVAEPVWDDEDTRAFYECLPDLRAFVPAVLLGETEPKISEQPVKNQDQPTETVPESDKGQVINNESGEALTESSALPEGESIEKIKDKEDKEKSKELERDKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSSETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFMKVHKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILVYGHGTPEQDVLDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYTLSKGALPLDIEFDLQDLFADLRPNMVRYTSLEEVNAALVELEEHDRIISADKASSEKHSDTEKPLSRTSSNTVVGNGQGIDNGAEENGVQDDVNDSETDSGSGTIDAEGHDDEDLDEENHDDGCETEDEDDDDDGPGPASDEEDEVRVRQKVTEVDPLEEANFDQELKAVMQESMEQRRQELRGRPTLNMMIPMNVFEGSTRDHHGRGTGGESGDEALDEETGGNREVQVKVLVKRGNKQQTKQMYIPQNSSLVQSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGSQPTNWMLSGGNRGSGRGNTLEGGSGRSGGSRHRHHNYTGSGIYYSRRK* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1697 1193 SUPERFAMILY ARM repeat 471 665 IPR016024 -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 1142 1170 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 384 465 - -
Dod03g1697 1193 Pfam Up-frameshift suppressor 2 996 1131 IPR007193 -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 426 465 - -
Dod03g1697 1193 PANTHER - 1 1192 - -
Dod03g1697 1193 Coils Coil 545 565 - -
Dod03g1697 1193 Coils Coil 432 461 - -
Dod03g1697 1193 SUPERFAMILY ARM repeat 78 198 IPR016024 -
Dod03g1697 1193 Pfam MIF4G domain 679 873 IPR003890 GO:0003723|GO:0005515
Dod03g1697 1193 Pfam MIF4G domain 477 661 IPR003890 GO:0003723|GO:0005515
Dod03g1697 1193 MobiDBLite consensus disorder prediction 963 994 - -
Dod03g1697 1193 SUPERFAMILY ARM repeat 672 897 IPR016024 -
Dod03g1697 1193 Gene3D - 14 324 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 1 22 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 904 1018 - -
Dod03g1697 1193 Gene3D - 435 661 - -
Dod03g1697 1193 Coils Coil 17 37 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 995 1017 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 904 918 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 1053 1076 - -
Dod03g1697 1193 SMART if4_15 62 284 IPR003890 GO:0003723|GO:0005515
Dod03g1697 1193 SMART if4_15 474 662 IPR003890 GO:0003723|GO:0005515
Dod03g1697 1193 SMART if4_15 677 878 IPR003890 GO:0003723|GO:0005515
Dod03g1697 1193 MobiDBLite consensus disorder prediction 1136 1193 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 386 418 - -
Dod03g1697 1193 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 1 1192 IPR039762 GO:0000184
Dod03g1697 1193 MobiDBLite consensus disorder prediction 317 349 - -
Dod03g1697 1193 Gene3D - 672 901 - -
Dod03g1697 1193 MobiDBLite consensus disorder prediction 1054 1076 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1697 K14327 - gmx:100786092 2038.08