Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1686 ATGGCCGTGGAGGAGGAACAACACGACAAGACGGTGAGGATATTCGTGGGAGGACTAGCAGAATCAGTAACCGCCGAAGACCTTCGCAGGTTGTTTGGCTCTCTGGGCATCGTCGAAGGGGTCGAAACTATCCGAACCAAAGGTCGCAGCTTTGCCTATGTTGACTTCCTCCCCTCCCCCACCGATCAGAAATCTCTCCCCAAGCTTTTCAGCAAGTATAATGGTTGTCTTTGGAAGGGTGGAAAGCTGAGACTTGAGAAGGCCAAAGAACATTATCTTGTGCGGTTGAAACGAGAATGGGAAGAGGACGCTGCTGCTGCTGCTGCCGCTGAGCTTGTTAGTAGCGAACCAGTAACTAGTAATATTGGTGAGGATAAATTAGAGGAAAAGTCCCACACAAGGGAAAGTTTAAAGACAAAGCACCTCCATATTTACTTTCCCAGATTGAAAAAGGTGAAATCCATACCATTCACTGGAACTGGCAAGCACAAGTACAGTTTCCAGAATATTAAAGTTCCTTCTCTCCCTGTGCATTTCTGTGATTGTGAGGAACATTGTAGTCCTTCTGGCGCAGAAAGAGGAAAGCTATATTTCAATGGGGCTACAGAAAGTGGTGGAATGAATGATGAAGAAATTAACATTATGAATGCTGTGATAAAAAAACTATCTGAAAAAGAAAACGTTTCCAGCAAGAAGCATCTTGAAAACGAGCAGGATTCTTTTGAATCACCTGATGCTTTACATTCTGACGAATGTGAAGTAGACAGTGCAACAGATGAAGATGATCTCATCATTAACATGGACACAGAGAAAAATAAAACAGCTTTAATAGGGAGCGAGGAACTTGAAAGGATCTTGGAAAATCAGGAATTATGGTCGAATAAGACAAGAGTTGCTAAGGAAGAACCGAACAAGAATATGCTTGACATGCATAAAAGGCATAATAGCAATTCTAACAAGAAGAGAAAATCACTTCCCACATTGGAAAGGGAAAGCAATGAACGTGTGTCTACTACTGCTGGAAGCAAGAGTAACATGCAGACCCTTCCAGAAAAGCTGGGATCTGGTGCAGAACCTTCTGAGTCAGAAGATGATGATTTTGGGGAATCAACTAAAGTTTCATGGTCTCAGAAGTCTTCATGGAAAGAACTGCTTGGTGATGGAGGTAATACTGCTTTCAGTGCCTCGCTCATATTGCCAAAGTTTGATTCCGGTGAAGAAGAACAAAAATCAGACAGCCCGAGCCCGTCCATAGATACAAATGACAAAACTGAAGACACGGAAGGGGATGAACACCAAGGGAGCAAACCCACCAATACAGAAGCGATAAAGGAGCTTACTGAAGCTCATCCTACCAATACAGAGGTGATAGAAGAGCATGTTGAAGCTCAGCCTTCTGACAAAAATGTGGCACCAAACAAGACCGGCCGAGGCGCTTCATGGCGGCAAAAGCAATCCTGGACCCAATTGGTTAGTGCGGATAATAATTCATTTAGCGTTTCACAAATTTTGTCTGGCATTACTTTCCCAGAGCCGATGACCGAGGAGCCCATTGTGGACCCTGCCAATTCCAATGATTGCAAGCATACTGGTGAAGTTAAGGATCCTATTATTGAAGTTGTTATACCAGAAAAGAGTCAGCATGTTGGTGTCAGTGATATTGCTTCTGCTCCAATAGTTGAGAAAAAAATTGAGACAAGACCAAGAGAAGGATCCTCCGAAGAAACAATGCCAAAAGAAAGATCCACATCAAATGTTGAAATAGGCGAAACTTGCACATTCATGAGAAGTTCTGCTTCTTTGAAAGACTGGGCAAAAGCTAAGGCAGCTATGAGAGGGTCGCTCAAAAGAAAACGTGTTGAGAAGTAA 1869 0.4323 MAVEEEQHDKTVRIFVGGLAESVTAEDLRRLFGSLGIVEGVETIRTKGRSFAYVDFLPSPTDQKSLPKLFSKYNGCLWKGGKLRLEKAKEHYLVRLKREWEEDAAAAAAAELVSSEPVTSNIGEDKLEEKSHTRESLKTKHLHIYFPRLKKVKSIPFTGTGKHKYSFQNIKVPSLPVHFCDCEEHCSPSGAERGKLYFNGATESGGMNDEEINIMNAVIKKLSEKENVSSKKHLENEQDSFESPDALHSDECEVDSATDEDDLIINMDTEKNKTALIGSEELERILENQELWSNKTRVAKEEPNKNMLDMHKRHNSNSNKKRKSLPTLERESNERVSTTAGSKSNMQTLPEKLGSGAEPSESEDDDFGESTKVSWSQKSSWKELLGDGGNTAFSASLILPKFDSGEEEQKSDSPSPSIDTNDKTEDTEGDEHQGSKPTNTEAIKELTEAHPTNTEVIEEHVEAQPSDKNVAPNKTGRGASWRQKQSWTQLVSADNNSFSVSQILSGITFPEPMTEEPIVDPANSNDCKHTGEVKDPIIEVVIPEKSQHVGVSDIASAPIVEKKIETRPREGSSEETMPKERSTSNVEIGETCTFMRSSASLKDWAKAKAAMRGSLKRKRVEK* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1686 622 MobiDBLite consensus disorder prediction 296 486 - -
Dod03g1686 622 SMART rrm1_1 13 86 IPR000504 GO:0003723
Dod03g1686 622 MobiDBLite consensus disorder prediction 296 314 - -
Dod03g1686 622 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 56 IPR000504 GO:0003723
Dod03g1686 622 MobiDBLite consensus disorder prediction 451 465 - -
Dod03g1686 622 SUPERFAMILY RNA-binding domain, RBD 9 89 IPR035979 GO:0003676
Dod03g1686 622 MobiDBLite consensus disorder prediction 565 589 - -
Dod03g1686 622 MobiDBLite consensus disorder prediction 468 486 - -
Dod03g1686 622 PANTHER TRANSCRIPTIONAL REGULATOR 4 619 - -
Dod03g1686 622 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 90 IPR000504 GO:0003723
Dod03g1686 622 Gene3D - 2 92 IPR012677 -
Dod03g1686 622 CDD RRM_NOL8 13 89 IPR034138 -
Dod03g1686 622 MobiDBLite consensus disorder prediction 565 581 - -
Dod03g1686 622 MobiDBLite consensus disorder prediction 403 438 - -
Dod03g1686 622 MobiDBLite consensus disorder prediction 229 251 - -
Dod03g1686 622 MobiDBLite consensus disorder prediction 331 351 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1686 - - ahf:112751244 802.742