Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1681 ATGGACTCCCCACCTTCCCAACACCACCAGTGGGGAAGGTCACCAACAAGTACCGAATCCCCAACCAACAACAATTCCCGAATCCCGCAGCACCACCGAAGCTCCTCATCATCCTCCCTCACCAAATCCAACTCAGACACCATCCAATCCCTCTCTTCCATCCTCAACAACCCTCACGCCTCCGACGCCGCCGCCTCATGGGTCGGCTGGTGGTCATCCTCCACCGCCGTGTCGCCTCCCGACTTCGCCCCCATCGCCACCACCAAAGCCGCCTCCGAAATCACCCGATCCGACTTCCACTCCTACCTCTCCCCAATCTCCGAACCCTACCACCGCTTCGAAGACATCCGCAACCACGCCTCCAAGGAGATCGGTGGCGATTCCTCCCTCGACGGCGGCGGAGCGGGAGAAGCACTTGTGGCGTGCCTCCGCGAGGTGCCGGCGCTTTACTTCAAGGAGGATTTCCGGCTGGAGGAAGGAGCGACGTTCAAGGCCGCGTGCCCGTTCTCTGGCGCGGGGGAGAACCTGGCGCTGCAGGAGAAGCTGTCGCACTACCTTGACGTGGTGGAGCTGCACCTTGTGAGGGAGATCTCGCTCAGGTCGAGCTCATTCTTCGAGGCGCAGGGGCAGCTGCAGGACCTCAACGCCAAGATCGTGGAAGGATGCGCTCGGATTCGGCAGCTCAAGGAGACGATTCGGCTCCTCGATTCGGATCTAGTCGAGTCGGCGAGGCAGATTCAGGACCTGAATGGCACCAGGACTAACCTCCTTGCGCTTCAGCAGAAATTGAGGCTTATATTATATGTTAACCAAGCTGTCTCCGCTCTCAAATTGCTTGTTGCGTCTGCAGATTGTGCTGGAGCGCTGGATGTAATTGACGATTTGCGGCATTTGCTGGATGGAGATGAGCTTACTGGTCTGCATTGCTTTCGTCATCTTAGAGATCATGTGATAGGCTTTGTAGAATCCATAAACAGCATTCTTTCAGCAGAGTTTATTCGAACTTCCATACACGATGCTGCAGAAACAGATGTGATAATTTTATCGAAAGCCAAAGCAAGGGCTTGCCTTTCGATAAATGGAAAAGATAATGAAGTGAAGTTGGATGAAGAAGAAACCAGTAATTTCAAAGATCGGCTTCTTCCTACTGTAATTGGATTGCTTAGAACAGCTAAACTTCCGTCTGTTCTGAGGATCTATCGAGAAACTTTAACAGCTGATATGAAGAGTGCTATTAAGACTGCTGTTGCTGAGTTGCTTCCAGTTCTTGCGGCACGAGGTTCAAATTCAGAGTACTTTTCTGGAGACAGAGCTGTAGATGCCGATGGTGGCGGTGCATCACTTGCTAGCAAGTTGAGGAGCCTATCATCTGATTGCTTTGTGCATCTACTGAGTGCTATTTTCATGATAGTAGAGGCTCATTTAATGCGGGCTGCTGAAGTGAAAAAGGCCATTGAATGGATTTTGAGCAACCGTGATGGTCACTACGCTGCTGATTCTGTCGCTGCTGCAATAGCTCATGGTGCTGCAGCAGCTGAAACATCCCATGAAAGCGAGGTTCATGGTAATGCATTTTTGTTGCATTCACCACAACGAGGTGCTTCAAGGGGTTCTGTTCAGGGGAAAGCAGTTGATGCTGCAAGCTCTGCAAACATGTCAAAAAATTTCAGAGCTGATGTATTGCGAGAAAACGCAGAAGCTGTGTTTGCAGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTAGGGGTCCGTGCTGTTCTCCATCCTAGGTTGAAATTGCAGGAGTTTCTCACCATATACAACATTACACAGGAGTTCATTACTGCTACAGAAAAAATTGGTGGAAGATTGGGATACAGCATCCGTGGGACACTGCAGTCACAGGCCAAAGCTTTTGTTGACTTTCAGCATGAATCTCGGATGGCAAAAGTTAAGGCAGTGCTTGACCAGGAAACATGGGTGGAGATAGATGTGCCCGACGAATTTCAATCCATCGTCAATTTGCTTTTTTCATCTGATGCATTGCATGCTGAGAACCTTAATGGTTCTGAGGATGTTAATTCAACTAGTTACAATGACATGGTGACTAACAATGATGTTCTGCCCATGGCGGACACTGTACAGTTAAATGCTGAACAGCCAGTGGAACAGACTAATTCCATTGAATTGTCTACGGATGGTGCTGCATTAGATAGATCTAAACCCCTATCTGATTCAATTGAAAGAAATAGAGCTCATAGTAAGATATCATCGGCACAGAGTAACAATTCCGAGAAAGACCATAAAAAAGCTGCATCTCAGGCTCTTTTCTACAAAGGTGTTGGTTATCACATGGTAAACTGCGGCTTAATATTGCTGAAGATGCTGTCAGAGTACATTGATATGAACAACCTTTTGCCGACACTATCTTCAGAAGTTGTTCATCGTATAGTAGAAATCTTGAAATTTTTCAACACAAGAACTTGCCAACTTGTGCTTGGGGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACTTCTAAACATTTGGCGTTGGCAAGTCAAGTCATTAGTTTTGTCCATGCTATTATTCCCGAAATTCGGCAGATTCTTTTTCTGAAGGTACCGGAGACTAGAAAAGCATTATTGCTTTCAGAGATTGATCGAGTTGCTCAGGATTATAAAGTTCACAGAGATGAAATACATTCTAAATTAGTTCAGATAATGCGAGAAAGGTTACTAGTGCATTTACGTGGGTTGCCTCAAATTGTTGAGAGTTGGAATAGACCTGAGGATGCTGACCCCCAGCCAAGCCAGTTTGCTCGGTCCCTTACGAAGGAAGTTGGATACCTCCAACGTGTTCTATCTCGTACTTTGCATGAAGAAGATGTTCAAGTAATTTTCAGGCAAGTGGTTGTTATATTTCATTCACAAATTTCAGAAGCATATTCAAGATTTGATATAAGCACTTCCCAAGCACAGACTAGGCTCTATCGGGACACCAAACATATTCTTCAATGTATACGGTCATTACCATCGGGTGATTTGGGTAAATCAGATACCCCAAATTGGGGTCAGCTGGATGAATTCTTGGTGCAAAGATTTGGGACTGACGCAGTTCAGTAA 3114 0.4705 MDSPPSQHHQWGRSPTSTESPTNNNSRIPQHHRSSSSSSLTKSNSDTIQSLSSILNNPHASDAAASWVGWWSSSTAVSPPDFAPIATTKAASEITRSDFHSYLSPISEPYHRFEDIRNHASKEIGGDSSLDGGGAGEALVACLREVPALYFKEDFRLEEGATFKAACPFSGAGENLALQEKLSHYLDVVELHLVREISLRSSSFFEAQGQLQDLNAKIVEGCARIRQLKETIRLLDSDLVESARQIQDLNGTRTNLLALQQKLRLILYVNQAVSALKLLVASADCAGALDVIDDLRHLLDGDELTGLHCFRHLRDHVIGFVESINSILSAEFIRTSIHDAAETDVIILSKAKARACLSINGKDNEVKLDEEETSNFKDRLLPTVIGLLRTAKLPSVLRIYRETLTADMKSAIKTAVAELLPVLAARGSNSEYFSGDRAVDADGGGASLASKLRSLSSDCFVHLLSAIFMIVEAHLMRAAEVKKAIEWILSNRDGHYAADSVAAAIAHGAAAAETSHESEVHGNAFLLHSPQRGASRGSVQGKAVDAASSANMSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMAKVKAVLDQETWVEIDVPDEFQSIVNLLFSSDALHAENLNGSEDVNSTSYNDMVTNNDVLPMADTVQLNAEQPVEQTNSIELSTDGAALDRSKPLSDSIERNRAHSKISSAQSNNSEKDHKKAASQALFYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRIVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIIPEIRQILFLKVPETRKALLLSEIDRVAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLHEEDVQVIFRQVVVIFHSQISEAYSRFDISTSQAQTRLYRDTKHILQCIRSLPSGDLGKSDTPNWGQLDEFLVQRFGTDAVQ* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1681 1037 Pfam Vps54-like protein 778 908 IPR012501 GO:0042147
Dod03g1681 1037 MobiDBLite consensus disorder prediction 722 762 - -
Dod03g1681 1037 Gene3D - 875 915 - -
Dod03g1681 1037 PANTHER VACUOLAR PROTEIN SORTING 54 22 1036 IPR039745 GO:0000938|GO:0042147
Dod03g1681 1037 Coils Coil 211 231 - -
Dod03g1681 1037 MobiDBLite consensus disorder prediction 1 44 - -
Dod03g1681 1037 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 22 1036 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1681 Dod-Chr3 23696889 23726270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1681 K17600 - gmx:100804432 1592.79