Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1678 ATGGCCTCAGAAAATGAAGAGAAAGTAGAGCTTGGTGGTTTCAATTCAGTTACTGAGACAAAGCCAAAGAAGGATTGGGTCCTTCTGTCCCTCAGGGTGGTTGCATTTTTGGCCACTGCATCTGCCACAATTGTGATGGCACTCAACAAACAGACCAAAAGTTTTGTACTTGCTACCATTGGTAGCACCCCAATAACTGCTACTATCACTGCAAAGTTTAACCAAACTCCAGCTTTTGTGTTCTTTGTGATAGCCAATGGAAACGCCAGTCTGCATAACTTGGTGATGATAGCAGTGGATATATTAGGACCCCACTATGATTACAAGGGACTCCGCCTTGCATTGATTGCAATATTAGACATGATGGCTGTGGCTTTGGCATCAGCTGGGGATGGTGCAGCAACGTTCATGTCAGAATTGGGAAGGAATGGCAATTCTCATGCGAGGTGGGATAAGATATGTGACAAATTCGGAACCTATTGCAACAGAGCTGGTGTTGCTCTCATCACCTCTTTCGTTGGCTTCATTCTCCTGATGATTATTACAGTGATGTCTATTATCAAGCTGCTCAAGCCAAATCGCATTAACCAAGCTCCTTGA 600 0.4417 MASENEEKVELGGFNSVTETKPKKDWVLLSLRVVAFLATASATIVMALNKQTKSFVLATIGSTPITATITAKFNQTPAFVFFVIANGNASLHNLVMIAVDILGPHYDYKGLRLALIAILDMMAVALASAGDGAATFMSELGRNGNSHARWDKICDKFGTYCNRAGVALITSFVGFILLMIITVMSIIKLLKPNRINQAP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1678 199 Pfam Casparian strip membrane protein domain 23 177 IPR006702 -
Dod03g1678 199 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 29 189 IPR006459 -
Dod03g1678 199 PANTHER CASP-LIKE PROTEIN 1B2 19 194 - -
Dod03g1678 199 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 19 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1678 Dod-Chr3 23645013 23646918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1678 - - gmx:100792043 318.931