Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1650 ATGACTTGTAAGTATGAGCGTCAATTCAAGTATGTGCTTGTTGTGATGTGTCTATGGGCTTGGTCTGGGTCCTTGGCTTTTTCAACTTCTGATGATGGGTTGATGAGGGTTAGTCTAAAAAGGAGGAATTTAGACCGTCGCAGCCTTTATGCTGCGAGAATCAAGGAGGCTGCTCATCCTGGAGATTTGGGGAGTGCTGGTAAAAATCATTCAGCTGCCAACATAGTATATCTGAAGAATTATCTTGATGCGCAATATTTTGGGGAAATTAGTATAGGTTCACCCCCACAATACTTCAATGTTGTATTTGACACTGGAAGCTCAAATCTGTGGGTCCCATCTTCCAAATGCATCTTTTCTGTTGCTTGCTATTTTCATTCCAAGTACAGGTCAAGGGGTTCTACCACCTATACTGAAATTGGAACACCTTGTAAAATCCCTTATGGCCATGGATCCATTTCTGGATTCTTCAGCCAAGATAATGTAAAAGTCGGGGACATCATCATCAAGGATCAAGTATTTGCTGAGATTACAAAGGCAGGATCTTTGGCACTTTTAGCTGTGCCTTTTGATGGGATACTTGGACTTGGATTTCAGGATATTGCAGTTGGAGAAGTCACACCAGTGTGGTATAATATGATAGAACAAGGGCACATATCTCAAAAAATTTTCTCTCTTTGGTTAAATCAAGATCCAATGGCAGAAATAGGGGGTGAGATTGTCTTTGGTGGTATTGACTTTAGCCATTTCAGAGGTGACCACACTTATGTTCCACTGTCTCAAGAGGGTTATTGGCAGATTGATATAGGGGATGTTCTACTTGCAAATAATTCGACAGGGTTATGTGAGGGTGGCTGTGGTGCAATTGTGGACTCAGGGACATCTTTAATTGCTGGTCCAACTACTGTTGTGACTCAAATTAACCATGCGATTGGAGCTGAAGGATATGTGAGTTTTGAGTGTAAAAATGTTCTCCATAACTATGGGAATTTGATATGGGAATCATTGATTTCTGGGCTAAATCCTGAAAACATATGTATTGACATTGGACTATGTTCCCATGATGGAGCTCAGAAAATGCATGATGTTATTGAAACAGTGGTGCATGATGAAAATTGGGATGGCTCAACTTCTAGGGAGAGTCCCTTTTGTACTTTTTGTGATAGGATTGCCTTTTGGATACAATCTCAGCTTAAGCAAAGTGATGTGAAGGACAAAATATTAAAATATGTGGATGAGCTGTGTGAGAAGCTCCCAAATCCAGCAGGACAATCATTTATAAGCTGCCACAGTATTGCCGTTATGCCACATATTACTTTCACAATTGGAAACAAACAATTTCCTCTCTCTCCAGAACAGTATATACTTAAAGTTGAAGAAGACAACGTCTGCTATGCCGGTTTTGTTGCTCTAGATGTGCCTCGTCCACAAGGTCCCCTCTGGGTTCTTGGAGATATTTTCTTGGGGGCATATCACACAGTGTTCGACTCTGGCAATCAACGTATAGGGTTTGCAGAAGCTGCACAATCATAG 1533 0.411 MTCKYERQFKYVLVVMCLWAWSGSLAFSTSDDGLMRVSLKRRNLDRRSLYAARIKEAAHPGDLGSAGKNHSAANIVYLKNYLDAQYFGEISIGSPPQYFNVVFDTGSSNLWVPSSKCIFSVACYFHSKYRSRGSTTYTEIGTPCKIPYGHGSISGFFSQDNVKVGDIIIKDQVFAEITKAGSLALLAVPFDGILGLGFQDIAVGEVTPVWYNMIEQGHISQKIFSLWLNQDPMAEIGGEIVFGGIDFSHFRGDHTYVPLSQEGYWQIDIGDVLLANNSTGLCEGGCGAIVDSGTSLIAGPTTVVTQINHAIGAEGYVSFECKNVLHNYGNLIWESLISGLNPENICIDIGLCSHDGAQKMHDVIETVVHDENWDGSTSRESPFCTFCDRIAFWIQSQLKQSDVKDKILKYVDELCEKLPNPAGQSFISCHSIAVMPHITFTIGNKQFPLSPEQYILKVEEDNVCYAGFVALDVPRPQGPLWVLGDIFLGAYHTVFDSGNQRIGFAEAAQS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1650 510 Gene3D Acid Proteases 35 244 IPR021109 -
Dod03g1650 510 SUPERFAMILY Saposin 318 419 IPR011001 -
Dod03g1650 510 ProSiteProfiles Saposin B type domain profile. 316 356 IPR008139 -
Dod03g1650 510 PRINTS Pepsin (A1) aspartic protease family signature 238 251 IPR001461 GO:0004190|GO:0006508
Dod03g1650 510 PRINTS Pepsin (A1) aspartic protease family signature 288 299 IPR001461 GO:0004190|GO:0006508
Dod03g1650 510 PRINTS Pepsin (A1) aspartic protease family signature 92 112 IPR001461 GO:0004190|GO:0006508
Dod03g1650 510 PRINTS Pepsin (A1) aspartic protease family signature 481 496 IPR001461 GO:0004190|GO:0006508
Dod03g1650 510 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 11 508 - -
Dod03g1650 510 Pfam Eukaryotic aspartyl protease 85 507 IPR033121 -
Dod03g1650 510 Pfam Saposin-like type B, region 1 382 419 IPR007856 GO:0006629
Dod03g1650 510 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 288 299 IPR001969 GO:0004190|GO:0006508
Dod03g1650 510 Gene3D - 316 419 - -
Dod03g1650 510 Gene3D Acid Proteases 245 508 IPR021109 -
Dod03g1650 510 ProSiteProfiles Saposin B type domain profile. 380 421 IPR008139 -
Dod03g1650 510 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Dod03g1650 510 ProSiteProfiles Peptidase family A1 domain profile. 86 505 IPR033121 -
Dod03g1650 510 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 11 508 IPR001461 GO:0004190|GO:0006508
Dod03g1650 510 SUPERFAMILY Acid proteases 15 507 IPR021109 -
Dod03g1650 510 Pfam Saposin-like type B, region 2 320 352 IPR008138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1650 Dod-Chr3 23046258 23051608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1650 K08245 - gmx:100500551 816.994