Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1626 ATGGCAAAGCTAAGTTCTCCTTTTGGTTGCATAATCTTAATTCAGTTCATTGCTTCATTTAGTTTCAGCACATCGCAGAGTCTCATAAACGAGATTAGTACTAGTAGCACTACTAACATCAAAGCCTTTTTCATCTTTGGCGATTCAACAGTAGATTCTGGCAACAACAACTACATAGATACTATTCCTGAGAACAGAGCAGATTACAAGCCATATGGGCAAAATGGGTTTTTTGGAGAGTCCACAGGACGATTCTCAGATGGCCGTGTTATTGTGGATTTTATAGCTGAATATGCAAAGCTACCACTGCTTCCTCCATTTTTACAATCACGTGCTGATTACAGCAACGGTGTCAACTTCGCTTCTGGTGGTGCTGGTGTTCTTTCTGAAACCAATCAGGGAATGGTGATTGATCTGCCAACACAATTAAGCCACTTTGAAGAAGTGAGAAAATCACTGGCAGAAAAGCTTGGAGAGAAGAAGGCGAAGGAGTTGATTTCGGAAGCAATTTATTTCATCAGCATAGGAAGCAACGATTACATGGGTGGTTATCTGGGTAACCCAAAAATGCAAGAAAGCTACAATCCTGAACAATATGTTGGGATGGTTATTGGGAACTTGACACAAGCAATCCAAGCTCTGTATGAGAAAGGGGCTAGAAAGTTTGGGTTTTTAAGTTTGGCTCCATTGGGTTGCTTGCCAGCCCTCAGAGCTCTAAACCCTGAAGCCAGCAAAGGGCTTTGTTTTGAAGCAGCTTCTGCTCTTGCTCTCGCACATAATCATGCCCTGACTAATGTTCTCACAAGCCTCGAGCAGATCCTTAAAGGGTTCAAATATTCTAACTCTAATTTCTATGATTGGCTTCAAGACAGAATAAACAACCCCACTAAATATGGTTTTAAGGATGGAATCAATGCTTGCTGTGGAAGTGGGCCATATGGGGGCGTCTTCACTTGTGGAACCAAGAAAGAAAGAGATTACGAGTTATGTGACAACTTTGGCGAGTATGTCTGGTGGGATTCTTTCCACCCAACAGAGAAGATCCACGAGCAATTTGCTCAGGCTTTATGGAGTGGACAACCTTCCTCGGTAGGACCGTATAATTTAGAGAGCCTCTTCTCCAGCAATGAGATCAACCTCACTATTGCTAATGTAGTTGACGATCCAGAAAACGAGCAAGGACAATTTCACTACTGA 1197 0.4244 MAKLSSPFGCIILIQFIASFSFSTSQSLINEISTSSTTNIKAFFIFGDSTVDSGNNNYIDTIPENRADYKPYGQNGFFGESTGRFSDGRVIVDFIAEYAKLPLLPPFLQSRADYSNGVNFASGGAGVLSETNQGMVIDLPTQLSHFEEVRKSLAEKLGEKKAKELISEAIYFISIGSNDYMGGYLGNPKMQESYNPEQYVGMVIGNLTQAIQALYEKGARKFGFLSLAPLGCLPALRALNPEASKGLCFEAASALALAHNHALTNVLTSLEQILKGFKYSNSNFYDWLQDRINNPTKYGFKDGINACCGSGPYGGVFTCGTKKERDYELCDNFGEYVWWDSFHPTEKIHEQFAQALWSGQPSSVGPYNLESLFSSNEINLTIANVVDDPENEQGQFHY* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1626 398 Pfam GDSL-like Lipase/Acylhydrolase 44 355 IPR001087 GO:0016788
Dod03g1626 398 CDD SGNH_plant_lipase_like 42 359 IPR035669 -
Dod03g1626 398 Gene3D SGNH hydrolase 29 361 IPR036514 -
Dod03g1626 398 SUPERFAMILY SGNH hydrolase 43 358 - -
Dod03g1626 398 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 32 380 - -
Dod03g1626 398 PANTHER - 32 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1626 Dod-Chr3 22592454 22594896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1626 40 375 Acyl Lipid Metabolism Gene Families AT4G10950 31.487 2.35e-59 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1626 - - gmx:100801228 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1626 03 22592454 22594896 Dod03g1626 03 22592454 22594896 ECH