Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1619 ATGAAAACGTCGTCGTTCGGGAGGTGCAGCGAGGGCGAAGAAATTCAGTTTCCGGAAAATCTCGGAACCTCGTCTCCGCCAACCGGTGGCCATGCCTACGGCGCCATGTTGCCGGTTTTCCTCGACAACCTCCGCAGTAACCACCACCAGGAGCTCGTCGAGATCACGTTGGAGCTCGACGACGACGCCGTCGTGCTCTGCAACGTCGCACCCGCAACCAGCGCCTCGCCGACGTCAGTCTCCGCCGCCGGCTCCGCTCCTGACGCCTCTCCGTCTTCGGTTTCGGCGGCCGGAGACTTCGCAGGCGGCGCCGGCGTCGCGAGGAGCCTGTCGCTCGCGTCGCGGATCCGGAGGAAGTTCCCGTGGCTGCGGTCGCATTCATCGACATCGTGGACGTCGGCGGCGTCGTCCGAGAGCGGCGCCGGTCCGGTGGAGGATCCGGTGGCCGTGGCGAGGAACGCGCGGAGAATGCGGTTGCAGATTGAACGGACGAGATCGAGAGCACAGAGCGCACTGAAGGGTTTGAGGTTTATCAGCAAGACCGGTGGTCAAGAAAGCGAGGTGCTGTGGAGGAAAGTGGAGGAGAGGTTCAGGTTGCTGGCCAAGGATGACTTGCTCGACAGAGAGGACTTCGGTGAATGCATTGGGATGGAGGATTCTAAGGAATTCGCGGTGGGTATATTTGATGCGTTGGCTAGAAGAAGGAAGGAAAAGAAAGTCAACAAAATAACGAAAGAGGAGTTGTATCAATTCTGGTTGCAAATTTCGGACCAGAGCTTTGATGCTCGTCTTCAGATTTTCTTTGACATGGCGGACAGTAATGAAGATGGAAGAATTACCAGGGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCTGCAAATAAGCTATCGAAGCTAAAAGAACAAGCTGAAAGATACGCTGCTTTAATAATGGAAGAATTGGACCCAGAAAACCTGGGTTATATCGAGTTGTGGCAGTTAGAAATGCTGCTACTACAAAAGGATAGGTACATGAATTACAGCAGACAACTAAGCACCCCAAGTGTAAGCTGGAGTCAGAATCTGACTAGCGTGAGGCCTGGAAATGTGATCCAAAGATTCAAGACGCTCCAGTGTCTTGCATTAGAATATTGGAGGAGGGGCTGGGTTTTGTTATTGTGGTTGGTTACCCTTGCTTGCCTTTTTGCCTGGAAATTTTACCAGTACAGAAACAAATCAACTTTCGAAGTCATGGCCTACTGCATACCAGTGGCCAAAGGTGCTGCAGAGACTCTCAAGTTCAATATGGCTCTCATCCTTTTACCAGTTTGTCGTAATACGTTGACATGGCTTCGTTCCACAAGAGCTAGGAAGTTTGTCCCTTTCGATGACAACATTAATTTCCATAAGATAATTGCATTAGCCATAGCTGTTGGAGTCGCTGTTCATGCAGGCACTCATCTGGCATGTGATTTCCCCCTCCTCGTAAATTCATCTCCGGAAAAATTCTCACTTATAGCCTCAGATTTCGACAACAAAAAACCCACATACGGAACACTTTTGAGTGGTGTTGAAGGGGTAACCGGAATCTCAATGGTTATTCTGATGGCCACGTCTTTTACACTGGCAACTCACCACTTCCGGAGAAGTGGAGTCAGGCTTCCTCCACCCTTCAACAGATTGACGGGCTTTAATGCGTTCTGGTACTCACACCACCTTCTTGGTCTTGTCTACATTCTGCTGGTTGTCCATGGATCTTGCTTGTATTTAACCCATCGGTGGTATGTGAAAACGACATGGATGTACATCTCTGTTCCACTATTACTGTACGTAGCGGAGCGCACTCTAAGGACTCGTAGATCAGCACATTACTCAGTAAAAATTCAGAAGGTTTCGGTGCTACCAGGAAATGTCTTCAGCTTAATCATGTCCAAGCCAACCGGATTCAAGTACAAAAGCGGACAGTACGTGTTTCTACATTGCCCAAAAATCTCTCCGTTTGAGTGGCACCCATTCTCAATCACCTCAGCACCAGGAGATGACTTCCTGAGCGTTCACATTCGCACAGTTGGAGATTGGACGAAAGCCCTTAAGCAAGTTTTCACGGAAGATGACACATTGCCTCCGGTTACTGGTCGAGTAACACTTGGTGAACTAGTGCAAAGGGATACAAGAGGACATCCGAAACTGCTCCTAGATGGCCCTTACGGAGCTCCAGCACAAGATTACCAGAGCTATGATGTATTGCTCCTCATAGGATTAGGAATCGGTGCAACTCCTTTCATTAGCATTCTCAGAAATCTTCTCAATGAGACGAGAACAATTGATGAAATGGAATCAAACACAGAAACAACCAGATCGGGAGACAGCTCAAATAGTTTTGCATCTTCAAATTTTACGCCAGGTGGAAACAAGAGATCACATAGGACCACAAATGCTTATTTCTACTGGGTCACCCGGGAACCGGGATCTTTTGAATGGTTTGAAGGAGTAATGGACCAAGTTGCAGAGATGGACCACAAAGGCCAAATTGAACTTCACAACCATCTTACAAGTGTATATGAAGAGGGGGATGCGAGATCAACCTTAATCACCATGATTCAGGCACTAAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTCGAGTAAGGACTCACTTTGCTAGGCCTAACTGGAGAGAAGTTTTCACCAAGATAGCCTCTAAACACCCGCAATCTACAGTAGGGGTGTTCTATTGCGGGATGCCAGTGTTGGCAAAGGAGCTAAAGAAGCTGTCACTTGAGCTGAGCAAAAAGACAACAACCCGCTTTGACTTTCACAAGGAGTATTTCTGA 2823 0.4864 MKTSSFGRCSEGEEIQFPENLGTSSPPTGGHAYGAMLPVFLDNLRSNHHQELVEITLELDDDAVVLCNVAPATSASPTSVSAAGSAPDASPSSVSAAGDFAGGAGVARSLSLASRIRRKFPWLRSHSSTSWTSAASSESGAGPVEDPVAVARNARRMRLQIERTRSRAQSALKGLRFISKTGGQESEVLWRKVEERFRLLAKDDLLDREDFGECIGMEDSKEFAVGIFDALARRRKEKKVNKITKEELYQFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAERYAALIMEELDPENLGYIELWQLEMLLLQKDRYMNYSRQLSTPSVSWSQNLTSVRPGNVIQRFKTLQCLALEYWRRGWVLLLWLVTLACLFAWKFYQYRNKSTFEVMAYCIPVAKGAAETLKFNMALILLPVCRNTLTWLRSTRARKFVPFDDNINFHKIIALAIAVGVAVHAGTHLACDFPLLVNSSPEKFSLIASDFDNKKPTYGTLLSGVEGVTGISMVILMATSFTLATHHFRRSGVRLPPPFNRLTGFNAFWYSHHLLGLVYILLVVHGSCLYLTHRWYVKTTWMYISVPLLLYVAERTLRTRRSAHYSVKIQKVSVLPGNVFSLIMSKPTGFKYKSGQYVFLHCPKISPFEWHPFSITSAPGDDFLSVHIRTVGDWTKALKQVFTEDDTLPPVTGRVTLGELVQRDTRGHPKLLLDGPYGAPAQDYQSYDVLLLIGLGIGATPFISILRNLLNETRTIDEMESNTETTRSGDSSNSFASSNFTPGGNKRSHRTTNAYFYWVTREPGSFEWFEGVMDQVAEMDHKGQIELHNHLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWREVFTKIASKHPQSTVGVFYCGMPVLAKELKKLSLELSKKTTTRFDFHKEYF* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1619 940 CDD NOX_Duox_like_FAD_NADP 624 882 - -
Dod03g1619 940 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 737 940 IPR039261 -
Dod03g1619 940 Pfam Ferric reductase NAD binding domain 740 922 IPR013121 GO:0016491
Dod03g1619 940 Gene3D - 161 280 - -
Dod03g1619 940 PRINTS Cytochrome B-245 heavy chain signature 558 578 IPR000778 GO:0016020|GO:0016491
Dod03g1619 940 PRINTS Cytochrome B-245 heavy chain signature 745 762 IPR000778 GO:0016020|GO:0016491
Dod03g1619 940 PRINTS Cytochrome B-245 heavy chain signature 466 484 IPR000778 GO:0016020|GO:0016491
Dod03g1619 940 MobiDBLite consensus disorder prediction 778 800 - -
Dod03g1619 940 MobiDBLite consensus disorder prediction 773 800 - -
Dod03g1619 940 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 41 940 - -
Dod03g1619 940 Pfam EF hand 265 287 IPR002048 GO:0005509
Dod03g1619 940 CDD EFh 242 289 IPR002048 GO:0005509
Dod03g1619 940 PANTHER NADPH OXIDASE 41 940 - -
Dod03g1619 940 Gene3D - 731 940 IPR039261 -
Dod03g1619 940 ProSiteProfiles EF-hand calcium-binding domain profile. 259 294 IPR002048 GO:0005509
Dod03g1619 940 SFLD NADPH oxidase subgroup (NOX) 160 940 - -
Dod03g1619 940 MobiDBLite consensus disorder prediction 74 96 - -
Dod03g1619 940 ProSitePatterns EF-hand calcium-binding domain. 272 284 IPR018247 -
Dod03g1619 940 Pfam Respiratory burst NADPH oxidase 161 262 IPR013623 GO:0004601|GO:0050664
Dod03g1619 940 MobiDBLite consensus disorder prediction 74 92 - -
Dod03g1619 940 SUPERFAMILY EF-hand 190 345 IPR011992 -
Dod03g1619 940 SUPERFAMILY Riboflavin synthase domain-like 618 732 IPR017938 -
Dod03g1619 940 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 615 736 IPR017927 GO:0016491
Dod03g1619 940 Gene3D Translation factors 604 702 - -
Dod03g1619 940 Pfam Ferric reductase like transmembrane component 421 576 IPR013130 -
Dod03g1619 940 MobiDBLite consensus disorder prediction 1 29 - -
Dod03g1619 940 Pfam FAD-binding domain 618 733 IPR013112 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1619 Dod-Chr3 22380134 22388923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1619 24 940 Miscellaneous Gene Families AT1G19230 62.591 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1619 K13447 - gmx:100805697 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1619 03 22380134 22388923 Dod03g1619 03 22380134 22388923 ECH