Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1577 ATGGCACGCTTGTCTTCGTCACTGGCATGGTGGTTCACGCTGGCGGTGCTCTTCTGCGCCGCCGCCAAGGCGTGGCCAGGGTGGAGCTCCGACGAGCCGAACCCAATCCGAATGGTGTCGGACGAGCTCCGAGACATGGAGGCTCAGGTTGTTCGGGTCATCGGGCGGACCCGGCGCGCGCTCTCGTTCGCGCGGTTCGCCCACAGGTACGGGAAGCGCTACGAGAGCGAGGAGGAAGTTAAGCTGCGGTTCCAGGTGTTCTCCGAAAACTTGAGGCTCATCAGATCAAACAACAACAAGCGCTTGCCTTACACTCTCGCGGTTAACCATTTTGCTGATTGGACTTGGGAGGAGTTCAAAAGACACAGACTAGGCGCTGCCCAAAAGTGCTCTGCCACCCTTAAGGGCAACCACAAGCTTACCGATGCTGTTCTTCCTCAGACGAAAGACTGGAGAAAAGAAGGTATTGTCAGCCCAGTTAAAGATCAAGGCTCCTGCGGTTCTTGCTGGACATTCAGCACAACTGGAGCTTTAGAAGCAGCCTACGCACAGGCCTTTGGAAAGAATATCTCTCTTTCTGAGCAGCAGCTAGTGGATTGTGCTGGTCGTTTCAATAACTTTGGTTGTAATGGTGGGTTGCCATCCCAAGCCTTTGAATATATTAAATACAATGGTGGACTTGACTCTGAGGAAGCATATCCCTACACCGGAGAGGATGGCATCTGCAAATTCAAAGCTGAAAATGTTGCTGTTCAAGTCCTTGACTCTGTTAATATTACCTTGGGTGCTGAGAATGAGTTAAAACATGCAGTTGCATTTGTTCGGCCAGTTAGTGTGGCATTTGAGGTGGTGACTGGTTTCCGATTCTATAAGGAAGGAGTTTACACTAGTGACACTTGCGGTAGCACCCCCCAGGATGTGAACCATGCTGTTCTTGCTGTTGGCTATGGAGTTGAAGATGGTGTCCCATATTGGCTCTTTAAAAATTCATGGGGAGATTCCTGGGGTGACAATGGCTACTTCAAGATGGAACTTGGGAAGAATATGTGCGGTATTGCCACTTGTGCTTCTTATCCTATCGTGGTCTAA 1089 0.5051 MARLSSSLAWWFTLAVLFCAAAKAWPGWSSDEPNPIRMVSDELRDMEAQVVRVIGRTRRALSFARFAHRYGKRYESEEEVKLRFQVFSENLRLIRSNNNKRLPYTLAVNHFADWTWEEFKRHRLGAAQKCSATLKGNHKLTDAVLPQTKDWRKEGIVSPVKDQGSCGSCWTFSTTGALEAAYAQAFGKNISLSEQQLVDCAGRFNNFGCNGGLPSQAFEYIKYNGGLDSEEAYPYTGEDGICKFKAENVAVQVLDSVNITLGAENELKHAVAFVRPVSVAFEVVTGFRFYKEGVYTSDTCGSTPQDVNHAVLAVGYGVEDGVPYWLFKNSWGDSWGDNGYFKMELGKNMCGIATCASYPIVV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1577 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 307 317 IPR025660 -
Dod03g1577 362 Pfam Papain family cysteine protease 145 360 IPR000668 GO:0006508|GO:0008234
Dod03g1577 362 PRINTS Papain cysteine protease (C1) family signature 309 319 IPR000668 GO:0006508|GO:0008234
Dod03g1577 362 PRINTS Papain cysteine protease (C1) family signature 324 330 IPR000668 GO:0006508|GO:0008234
Dod03g1577 362 PRINTS Papain cysteine protease (C1) family signature 163 178 IPR000668 GO:0006508|GO:0008234
Dod03g1577 362 PANTHER THIOL PROTEASE ALEURAIN 28 359 - -
Dod03g1577 362 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 359 - -
Dod03g1577 362 SMART pept_c1 145 360 IPR000668 GO:0006508|GO:0008234
Dod03g1577 362 CDD Peptidase_C1A 146 359 IPR039417 -
Dod03g1577 362 SUPERFAMILY Cysteine proteinases 60 360 IPR038765 -
Dod03g1577 362 Pfam Cathepsin propeptide inhibitor domain (I29) 63 119 IPR013201 -
Dod03g1577 362 SMART Inhibitor_I29_2 63 119 IPR013201 -
Dod03g1577 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 163 174 IPR000169 -
Dod03g1577 362 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 324 343 IPR025661 -
Dod03g1577 362 Gene3D Cysteine proteinases 54 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1577 Dod-Chr3 21504957 21509294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1577 K01366 - jre:109008520 605.905