Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1564 ATGGCGTCGGTGTACATTCCGGTGCAGAACTCCGAGGAAGAGGTTAGGGTTGCGCTCGACCAGCTTCCTAGGGACGCGTCCGACATCCTCGACATCCTCAAGGCTGAGCAAGCGCCTCTCGATCTCTGGCTCATCATCGCGAGGGAGTATTTCAAGCAGGGAAAAATTGATCAATTTCGCCAGATTTTGGAGGAAGGATCCAGCCCTGAAATCGATGATTATTATGCTGACGTTAGATATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCCTACTACAGCTACCTTGGCAAAATAGAGACAAAGCAAAGAGAAAAGGAGGAGCATTTCATTTTGGCAACACAATATTACAATAAAGCATCAAGGATCGACATGCATGAGCCCTCCACTTGGGTTGGGAAAGGTCAGCTTTTGCTTGCAAAGGGAGAAGTGGAGCAGGCATCTGCTGCATTTAAGATTGTGTTGGATGGAGACCATGATAATGTTCCTGCTCTTCTGGGCCAGGCTTGTGTTGAGTTCAACCGTGGACGATATTCTGATTCACTTGAGTTGTACAAGAGGGCATTGCAAGTGTATCCCAATTGCCCTGCACCTGTTAGACTCGGCATAGGTCTTTGTCGCTACAAATTAGGTCAATTTGAGAAGGCTCGACAGGCATTTGAGCGTGTTTTGCAGCTAGATCCTGAAAATGTTGAGGCTCTTGTTGCACTTGCAATATTGGACTTGCGGACTAATGAAGCTTCTGGAATTAGGAAGGGAATGATAAAGATGCAGAGGGCATTTGAGATATACCCATACTGTGCAATGGCGCTGAATTACCTTGCAAATCATTTTTTCTTCACTGGTCAACATTTTTTAGTTGAGCAATTAACTGAAACTGCATTAGCTGTCACCAATCATGGCCCAACAAAGTCTCATTCTTATTACAATTTAGCACGCTCTTACCATAGCAAGGGGGACTATGACAAAGCTGGGTTGTATTACATGGCATCTGTCAAGGAAGTCAACAAGCCCCATGAATTTGTGTTTCCTTATTATGGTTTGGGACAAGTGCAATTAAAGTTGGGAGATTTTAGAAGTGCACTCTCAAACTTTGAAAAAGTTTTGGAGGTGTACCCCGATAATTGTGAGACATTGAAGGCACTTGGGCACATATATGTTCAGCTTGGTCAGACTGACAAGGGCCAGGACTTCATTAGGAAAGCAACAAAAATTGATCCCCGTGATGCACAGGCATTTCTTGAACTGGGTGAATTGTTAATTGTGTCTGACACAGGAGCTGCATTGGATGCATTTAAAACCGCTCGTACTCTTTTTAAGAAGGGAGGCCCAGAAGTACCAATTGAATTACTCAATAATATTGGTGTTATTCAGTTTGAAAGGGGAGAATTTGAGCTTGCTCAACAAACTTTTAAGGAGGCTTTAGGTGACGGCATATGGCTTTTCTTTATTAATGAGGAAAAGAAGTCTTCTGTTGATGCTGCTACTTCTACACTTCAGTTCAAGGATATGCAATTGTTTCATAAACTTGAAAGTAATGGTCACCATGTGGAATTACCTTGGGATAAAGTCACGGTGCTCTTTAACCTCGCCAGATTACTTGAGCAATTAAATGAATCTGGAACTGCAAGTATATTGTATCGCCTAATATTATTCAAGTACTCAGACTATATTGATGCGTATCTAAGGCTAGCTGCTATTGCAAAAGCTCGAAACAACATTCTGTTGAGCATTGAACTGGTTCATGATGCCCTGAAGGTGAATGACAAGTGTCCAAATGCATTATCTATGCTTGGTGACTTGGAGTTGAAAAATGATGACTGGGTGAAGGCGAAAGAAACTCTTCGGGCAGCTAGTGATGCAACTGATGGGAAGGACTCATATGCTACTCTTGCTCTAGGAAACTGGAATTACTTCGCAGCAGTTCGCAATGAGAAAAGAAATCCAAAGCTAGAAGCTACTCATTTGGAGAAGGCCAAGGAACTTTACACTAGAGTTCTGATTCAGCATTCTGCTAATCTATATGCTGCCAATGGTGCTGGGGTAGTTTTAGCAGAAAAAGGCCATTTTGATGTTTCGAAGGATATCTTCACTCAGGTTCAAGAAGCTGCAAGTGGCAGTGTTTTTGTCCAGATGCCTGATGTTTGGATAAATTTGGCCCATGTTTACTTTGCTCAGGGAAATTTCGCATTGGCTGTGAAAATGTATCAGAACTGCTTGCGGAAATTTTATTATAACACAGACTCTCAAATACTTCTATATTTAGCTCGTACCCATTATGAAGCTGAACAGTGGCAAGACTGTATAAAAACTCTACTGAGGGCCATCCACTTGGCACCCTCAAATTATACGTTAAGGTTTGATGCGGGGGTTGCTATGCAGAAGTTTTCAACATCAACGCTTCAGAAGGCAAAGAGGACTGCAGATGAGGTGAGAGCAACTGTTGCAGAGCTGCAAAATGCCGTACGTATATTCAGTCAGTTGTCTGCTGCATCCAACCAACATATTCATGGGTTTGATGAGAAGAAAATTGACACTCATGTCGGATACTGCAACCACTTACTTTCGGCTGCCAAAGTTCATGTTGAAGCAGCTGAGCGTGAGGAGCAGCAATTACGGCAGAGGCAAGAACTTGCTCGTCAGGTTGCATTGGCTGAGGAAGCCCGGCGAAAGGCTGAAGAGCAAAGGAAATTTCAGATGGAAAGGAGAAAACAAGAGGATGAGCTAAAGAGAGTGCAACAACAGGAGGAACATTTTAAGCGTGTTAAGGAACAATGGAAGAACAGCACGCATTCAAAACGGAAGGAAAGGTCAGACGATGAAGAGGGCGAGACCGGTGAGAAAAGGAGAAGAAAAGGTGGAAAGAAGAGAAAGAGGGATAAGCACTCAAAATCACGCAATGACACGGAAGATACCGAAGCTGATATGATGAATGAACAAGAAATGGAGGATGAAGATGAGCCCCAAACTATGGGGAATGATGACGCTGATGAGAATGCTCAGGGCCTTCTTGCAGCAGCTGGACTTGAAGATTCTGATGCAGAAGATGAGATGGCTGCACCCTCCTCAACCATCGCCCGCCGGCGGCAAGCATTATCTGAATCTGATGATGATGAACCATTACAGCGGCAATCAAGTCCTGTAAGAGAAAATTCTGGTGATGTGCAGGAGAGTGATGGAGAAATAAGGGAGAGGGGTAAAACAAATGGAGAGGATGCCAGTGATGAGGATTAA 3234 0.4363 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFRQILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRYSDSLELYKRALQVYPNCPAPVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAILDLRTNEASGIRKGMIKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGLYYMASVKEVNKPHEFVFPYYGLGQVQLKLGDFRSALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELLIVSDTGAALDAFKTARTLFKKGGPEVPIELLNNIGVIQFERGEFELAQQTFKEALGDGIWLFFINEEKKSSVDAATSTLQFKDMQLFHKLESNGHHVELPWDKVTVLFNLARLLEQLNESGTASILYRLILFKYSDYIDAYLRLAAIAKARNNILLSIELVHDALKVNDKCPNALSMLGDLELKNDDWVKAKETLRAASDATDGKDSYATLALGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSTSTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNQHIHGFDEKKIDTHVGYCNHLLSAAKVHVEAAEREEQQLRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFKRVKEQWKNSTHSKRKERSDDEEGETGEKRRRKGGKKRKRDKHSKSRNDTEDTEADMMNEQEMEDEDEPQTMGNDDADENAQGLLAAAGLEDSDAEDEMAAPSSTIARRRQALSESDDDEPLQRQSSPVRENSGDVQESDGEIRERGKTNGEDASDED* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1564 1077 Coils Coil 801 821 - -
Dod03g1564 1077 MobiDBLite consensus disorder prediction 1030 1044 - -
Dod03g1564 1077 Pfam Tetratricopeptide repeat 134 194 - -
Dod03g1564 1077 Pfam Tetratricopeptide repeat 718 781 - -
Dod03g1564 1077 SUPERFAMILY TPR-like 655 802 IPR011990 GO:0005515
Dod03g1564 1077 MobiDBLite consensus disorder prediction 974 993 - -
Dod03g1564 1077 ProSiteProfiles TPR repeat region circular profile. 342 375 - -
Dod03g1564 1077 ProSiteProfiles TPR repeat profile. 162 195 IPR019734 GO:0005515
Dod03g1564 1077 Coils Coil 855 922 - -
Dod03g1564 1077 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 1 1056 IPR031101 GO:0006355|GO:0016570
Dod03g1564 1077 ProSiteProfiles TPR repeat profile. 713 746 IPR019734 GO:0005515
Dod03g1564 1077 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Dod03g1564 1077 SUPERFAMILY TPR-like 168 475 IPR011990 GO:0005515
Dod03g1564 1077 Pfam Tetratricopeptide repeat 306 333 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 376 409 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 592 625 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 305 338 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 749 782 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 128 161 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 448 477 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 342 375 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 524 557 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 162 195 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 558 591 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 197 230 IPR019734 GO:0005515
Dod03g1564 1077 SMART tpr_5 713 746 IPR019734 GO:0005515
Dod03g1564 1077 Pfam Tetratricopeptide repeat 201 230 IPR001440 GO:0005515
Dod03g1564 1077 Gene3D Tetratricopeptide repeat domain 9 299 IPR011990 GO:0005515
Dod03g1564 1077 SUPERFAMILY TPR-like 97 331 IPR011990 GO:0005515
Dod03g1564 1077 Gene3D Tetratricopeptide repeat domain 493 649 IPR011990 GO:0005515
Dod03g1564 1077 ProSiteProfiles TPR repeat profile. 342 375 IPR019734 GO:0005515
Dod03g1564 1077 Gene3D Tetratricopeptide repeat domain 300 477 IPR011990 GO:0005515
Dod03g1564 1077 ProSiteProfiles TPR repeat region circular profile. 197 230 - -
Dod03g1564 1077 Pfam Tetratricopeptide repeat 353 412 - -
Dod03g1564 1077 Gene3D Tetratricopeptide repeat domain 650 837 IPR011990 GO:0005515
Dod03g1564 1077 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
Dod03g1564 1077 MobiDBLite consensus disorder prediction 1054 1077 - -
Dod03g1564 1077 MobiDBLite consensus disorder prediction 895 949 - -
Dod03g1564 1077 MobiDBLite consensus disorder prediction 895 1077 - -
Dod03g1564 1077 SUPERFAMILY TPR-like 449 615 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1564 K15176 - gmx:100794371 1922.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1564 03 21322646 21357057 Dod03g1564 03 21322646 21357057 ECH