Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1551 ATGAGTTTCATCTTCGGAAAGAGAAAGACTCCCGCAGAGCTTCTGCGGGAAAATAAGAGAATGTTGGACAAATCAATTAGGGAAATAGAACGAGAGAGGCAGGGTTTACAAACACAAGAGAAGAAACTGATTGCGGAGATAAAGAAAAGTGCCAAACAAGGCCAGATGGGTGCTGTTAGAGTTATGGCAAAAGATCTTGTCAGAACAAGGCATCAGATTGAAAAGTTTTATAAGCTAAAATCACAGCTCCAAGGTGTATCACTCAGGATCCAGACATTGAAATCAACACAAGCAATGGGTGAGGCAATGAAAGGCGTGACAAAGGCCATGGGGCAGATGAATAGGCAGATGAACTTGCCATCATTGCAGAAAATCATGATGGAATTCGAGAGACAGAATGAGAAGATGGAATTGACAACTGAAGTTATGGGAGATGCAATAGATGATGCTTTGGAAGGGGATGAAGAAGAAGAAGAAACAGAAGAACTAGTGAACCAGGTTCTAGATGAGATTGGAATTGACATAAACCAAGAGCTTGTGAATGCACCATCATCAGCTGTTGCTGCCCCAGCTGCAAAGACTAAAGTACCTCAAGTTGAAACTACAACGAATGATGATGGTGGGATAGATAGTGATTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAA 672 0.4107 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMMEFERQNEKMELTTEVMGDAIDDALEGDEEEEETEELVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQVETTTNDDGGIDSDLQARLDNLRKM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1551 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Dod03g1551 223 Coils Coil 12 46 - -
Dod03g1551 223 MobiDBLite consensus disorder prediction 185 212 - -
Dod03g1551 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
Dod03g1551 223 Gene3D - 6 181 - -
Dod03g1551 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1551 Dod-Chr3 21147120 21150282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1551 K12191 - gmx:100526885 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2388 05 50159380 50162364 Dod03g1551 03 21147120 21150282 PCT