Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1545 ATGATGTTGTCGAAATTTGAGGCTGGTAAGAAGAGTGGTGGTGGTGGTGGCGGCTGGGGTTCTGGTAGTAACCAGAAGAAGTTGTTGAAAGATGTTGAGACTATGAGCAAAGCTCTTTACGTGGACAGAACTTCTTCAAGGAATTCAGTTTCTGCTACAAGTTCTCGATCCAAACCCCTTTTACCTGATCCCAAATCGAGGCCTAAAGCCAGCCATAGCGATGATAGCAATTCGCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCATTGAAGGCCCTTTCACACATCCGCAATAAGAGGTTCAATTGTAGTTTTTATCTCCAAGTCCATTTGATTGAAGGGTTGCCTTCACATTTTGATGATGCCAGCCTTTCTGTGTACTGGAAGAGGCGCGACGGGGTTCTGGTGACCTGTCCGGCGGCTGTGGTTCAAGGTAAGGCTGAATTTGAAGAGAAGTTGACTTACACTTGCTCGGTGTATGGTAGCAGGGGTGGACCTCACCATTCGGCAAAGTATGAAGCGAAACATTTCTTGCTCTATGCTTCGCTTGTCAGTGCGCCGGAGCTTGATTTGGGGAAGCATCGGGTGGATCTCACGAGATTGCTTCCTCTCACATTGGAGGAGCTTGAGGAGGAGAAGAGCTCGGGTAAGTGGACTACGAGTTTTAGATTATCGGGAATAGCTAAGGGTGGCGTAATGAATGTCAGTTTTGGGTATGTGGTGGTTGGTGATAATGCTGGTGCTACCAGAGATGGCCATAAAAATGCTTCTAATGTTTTGACTTCAAAGCAGGGTAGTCTAGCTTCGGTGAGACCAGATGTTAAACCCAGACAGTTTGATGGAAGTAGCAGCATGAGGCGTGCTGGGAGTTTGCAAAGCTTTACTAGTCCGCATCCATCTCGAGCTGTAGATGAGATAAAGGATCTTCATGAGGTATTGCCAACGTCAAAGTCAGCACTAGCCAGCTCAATAGACATGTTGTATAAGAAATTTGATGAAGAAAAGGCAAGTGTTCCTCTGCAGGATAAACCTGCACTTGATGTATTCACTGAAAATCTTGAACCGATCAAGCTGGATGCATATGCTTCATCTGATCTTGGGAAAGAAAAGCCTGAAGAAATTGTTGGTGATGATGGAAATACAGGTCCAGTGCATGACAATCCTGAACTCATGTTCACAGAAAATCTTGAACCGATCAAGCTGGATGCATATGCTTCATCTGATCTTGGGAAAGAAATGCCCGAAGAACTTGTTGGTGATGATGGAAATACAGGTCCAGTGCATGACAATCCTGAACTCAATGTATTTCGTGAAAACCTGGAGACAGTCAAACCAGATGGCCATCCCCTGCCTGATTCTGCAAAAGAAAACCCTGAAGAGTGTCAAGGTAATGAGTTTTTTGTTGTTGATAAGGGCATAGAATTGTCACCAAATGAACCTATTAAACTAGAGGAATCCGTGATAATGGCTCCTGAGGGTTCTCCTGCAGTTGATGGTATATGTAACCTTGATACTGCTGCTCGACAATTGTCTTCTGAAGATAGTGTTAAACATGATTCCGTAGATGAGGTAGATGACAATTCCAAGGATCAAGCAGTGGCACATGAATTTGCTTACGAAAAGGATGGTTTATGCACTAAAGAACTGATCCTGCAAGAATTAGAATCAGCTTTGAACAGTGTCTCCGATTTGGAGGCAGCAGCCCTAGACTCTCCTGAAATTATGGAAGACAAATCTGAATATAAGATGAGAGAATCACATAGCTTGGATGATGTTACGGAATCAGTTGCCAATGAATTTTTAACCATGCTAGGCATTGAACACAGTTCAATGGGCTTGAGTTCTGAAAGCGAGCCAGAGTCTCCAAGAGAGCTCCTTTTAAGACAATTTGAGAAGGAGGCTCTGGATGGGGGTTTCTCTTTATTTGATTTTGACAATGATAATGATAATGAGGCGGATGGTAGCTATGATGTTGATTTTGACAATGATAATGATAATGAGGCAGACGGTAGCTATGATGCTTCTACTGGATCCGAGTGCTGGAACTTCTGTGAGGGTATTGAGTCATCATCCCTGTTCCAAGATCTGCAGGGGGAGTGTCTAGTTGAGTCTCAGGACACGAGAAGCAAACACAGGGCTCAGATGCTAGAGGACTTGGAAACAGAAACCTTAATGCGGGAATGGGGTTTGAATGAGAAGGCTTTTCATCATTCTCCGCCAAACGATGATTTCGGAAGTCCAATTCATTTACCAGCTGAAGAGCCTCCCACGTTGCCTCCTCTTGCTGAGGGGTTGGGCCCTTTTCTTCAAACGAAAGATGGGGGGTTTCTACGGTCTATGAATCCCACACTTTTCCAGAATGCAAAAAGTGGTGGGAGCTTAATTATGCAAGTTTCCAACCCTGTTGTCGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGGTTTTACAGTGTTTAGCGTCAGTTGGAATTGAAAAGCTCTCAATGCAGGCAAAGGAATTAATGCCTCTGGAAGATATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGCTTTAGAGGGAACAGAGAGGCAATGCCATTTGGAACATAATTTGATAGCAGTGCAAGATAGTACTTCCATGCAAAGGGACTTGAAAGGAAGACCATCTGGACTGAAGTCCGACAAGTATAGTTCAAGTTCAGCAGACAACCAGACAGGCTCAGAGTTTGTTTCATTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCGATGGAGGGTTTAAGAATACAATCTGGAATGTCAGAGGAGGAGGCTCCATCAAACATCATTGCCCAGTCCATTGGGGATATTTCAGCTCTCCAGGGCAAGGGGGTTGATATGAGTGGGTCCCTCGGCCTGGAAGGTGCTGCTGGTTTGCAGTTGATGGATACAAAAGGCAGCAGCAATGGTGTTGATGGGATAATGGGCCTTTCATTAACTCTTGATGAATGGATGAAACTGGATTCTGGTGAGATTGATGACATAGATAACATCAGTGAGCATACTTCCAAGCTTCTTGCAGCTCATCATGCTAACTCTTTTGACTTTATACGTGGGAATTCGAAGGGAGAGAGGAGACGAGGCAAAGGCAAAAAATGTGGTTTGCTAGGAAACAATTTCACCGTAGCATTAATGGTGCAACTCCGTGATCCCCTGAGAAATTATGAGCCCGTTGGAACTCCAATGCTTGCTCTTATACAAGTAGAGAGAGTGTTTGTCCCACCAAAGCAAAAAATTTACTGTACTGTGTCTGAGGTCAGGAACAACAATGATGAGGATGATGAGAGTGAAAAAGTACCGATGGTGGAGACGAAGGACGACAAGAAAGAGCAGAAAAGTTCTGAAGAAGAGGTCATTCCTCAGTTCAAAATTACTGAAGTCCATGTTGCAGGTGTGAAGAATGAACCTCACAAGAATGAACCTCAAAAAAAGAAGCTTTGGGGCACTTCAAGCCAGCAACAGTCTGGTTCACGCTGGTTGCTTGCTAATGGAATGGGGAAGAACAAGAAGCTTCCGATGAACTCAAAGGGTGCATTGAAATCTAGTGCTCCAGTTACCACAAAGGTGCAGCCTGGTGACACCTTGTGGAGCATATCGTCTCGAATTTATGGTACTGGAGCGAAATGGAAGGAATTGGCAGCACTCAATCCGCGTATAAGAAATCCCAATGTGCTCATACCAAGTGATACTATAAGACTTAGTTGA 3753 0.4434 MMLSKFEAGKKSGGGGGGWGSGSNQKKLLKDVETMSKALYVDRTSSRNSVSATSSRSKPLLPDPKSRPKASHSDDSNSQKDKKSIWNWRPLKALSHIRNKRFNCSFYLQVHLIEGLPSHFDDASLSVYWKRRDGVLVTCPAAVVQGKAEFEEKLTYTCSVYGSRGGPHHSAKYEAKHFLLYASLVSAPELDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGIAKGGVMNVSFGYVVVGDNAGATRDGHKNASNVLTSKQGSLASVRPDVKPRQFDGSSSMRRAGSLQSFTSPHPSRAVDEIKDLHEVLPTSKSALASSIDMLYKKFDEEKASVPLQDKPALDVFTENLEPIKLDAYASSDLGKEKPEEIVGDDGNTGPVHDNPELMFTENLEPIKLDAYASSDLGKEMPEELVGDDGNTGPVHDNPELNVFRENLETVKPDGHPLPDSAKENPEECQGNEFFVVDKGIELSPNEPIKLEESVIMAPEGSPAVDGICNLDTAARQLSSEDSVKHDSVDEVDDNSKDQAVAHEFAYEKDGLCTKELILQELESALNSVSDLEAAALDSPEIMEDKSEYKMRESHSLDDVTESVANEFLTMLGIEHSSMGLSSESEPESPRELLLRQFEKEALDGGFSLFDFDNDNDNEADGSYDVDFDNDNDNEADGSYDASTGSECWNFCEGIESSSLFQDLQGECLVESQDTRSKHRAQMLEDLETETLMREWGLNEKAFHHSPPNDDFGSPIHLPAEEPPTLPPLAEGLGPFLQTKDGGFLRSMNPTLFQNAKSGGSLIMQVSNPVVVPAEMGSGVMEVLQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAMPALEGTERQCHLEHNLIAVQDSTSMQRDLKGRPSGLKSDKYSSSSADNQTGSEFVSLEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIIAQSIGDISALQGKGVDMSGSLGLEGAAGLQLMDTKGSSNGVDGIMGLSLTLDEWMKLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGNSKGERRRGKGKKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKQKIYCTVSEVRNNNDEDDESEKVPMVETKDDKKEQKSSEEEVIPQFKITEVHVAGVKNEPHKNEPQKKKLWGTSSQQQSGSRWLLANGMGKNKKLPMNSKGALKSSAPVTTKVQPGDTLWSISSRIYGTGAKWKELAALNPRIRNPNVLIPSDTIRLS* 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1545 1250 MobiDBLite consensus disorder prediction 1 25 - -
Dod03g1545 1250 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1249 - -
Dod03g1545 1250 SMART LysM_2 1202 1250 IPR018392 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 1181 1201 - -
Dod03g1545 1250 Coils Coil 548 568 - -
Dod03g1545 1250 SUPERFAMILY LysM domain 1201 1249 IPR036779 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 1151 1170 - -
Dod03g1545 1250 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1249 IPR039614 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 653 672 - -
Dod03g1545 1250 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 99 224 IPR019448 -
Dod03g1545 1250 CDD LysM 1204 1249 IPR018392 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 43 81 - -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 273 300 - -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 1106 1133 - -
Dod03g1545 1250 ProSiteProfiles C2 NT-type domain profile. 94 242 IPR019448 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 738 766 - -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 653 669 - -
Dod03g1545 1250 Pfam LysM domain 1204 1248 IPR018392 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 43 60 - -
Dod03g1545 1250 Gene3D LysM domain 1194 1250 IPR036779 -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 62 81 - -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 284 300 - -
Dod03g1545 1250 MobiDBLite consensus disorder prediction 877 903 - -
Dod03g1545 1250 ProSiteProfiles LysM domain profile. 1201 1249 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1545 Dod-Chr3 21040568 21046451 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1545 - - mtr:MTR_2g040970 1562.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1545 03 21040568 21046451 Dod03g1545 03 21040568 21046451 ECH