Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1537 ATGCCGTACCGCCGCACGTGGCACTCCTCACCCTTCATGAGCCCTCCAGTGCTCATCATTCTCTTGCCAATTATCGCCCTCACGCTCCTCTTCTTCGCCGTGCCTCCGCTCCTCTCCGCCACCACCCACGTTCTCCGCCCATCCTCCGTCGTCAAGAAGAGCTGGGACTCCCTCAACATCCTCCTTGTCGTTTTCGCCATCTTGTGCGGCGTTTTCGCCAGACGAAGGGACGACGAGTCGCAGCACCAAGACGACGCCGTTCAGGATCGAAACGCAGCGTTTCGTAAAATGCCCTCGGAAGAAGGAGGTGGTAGCTATGTTTCGCAGCAATGGTTCGGGTTCTCTGAGGAGAGGAAGGGTTATGATCCCCCTCCGATCCAGTTGCAGTCACCGGCAACCGGCGTTACCCGGTTGAGGAGGAGCAGCAGCTCCTACCCAGATCTAAGGAACTGGGAAACCGGCGATGACCGGTTCAGGTTTCGTTTCTTTGACGACTTCGAGATTGACAAGCAGTATCGCTCGCCAGCGAGGGATCAAGTTAGTACCACCGTGGACCTCCGCACACGGACGCCGGCGGCTGAAGAAGGAGATGCTCAGGTCAAGGAAATTCCGGTGGATACCTTCGAGACTCGCTCTTCTCCTCCTACTCCGGAACCGCCGCCGAAGACACCGGCGCCTCCTACTCCGCCACCTCCACCTCCTCCTCCGCCGGCTGAATCTCGTCGGAAACCAAGACGGACGTATCAGAAAGTGGACAGTGTTAGTGAGATTACTGAGCTTGACGACGATCGCGAGTTCACGAGGATCCGGTCTCCGCCGCCAGCTCCACCGACTCCGCCACCGCCGGCGCCGGTGAAGACGCGATCGGAGCACAAGCACGGGAGGAGCGAGAGAAGGAAGAGCAGCGTGAAGAGAGACATAGCAACGGTTTGGGCTTCCGTACTCTCAAATCAGAGAAAGAAAAAGAAGAAGCCAAGGACAAAGAGCGATCACACTCATCACCATTACGATAACGTTATCGATGAGTTAACGAATAGTAGCACCATGCCGCCACCGTCGCCGGCGCCACCACCACCTCCACCTCCTCCTCCGCCTCCGCCTTCGGTTTTCCACAATTTGTTCCGTAAGGGACTTGGCAAGAGCAAGAAAATCCATTCAGTATCGGCGCCGCCACCGCCGCCGCCTCCTCCGCCATTGACTTCTTCGAGGAGATGGTCAAGGTGGAAGAGTGCGATCCCGACACCACCGCCACCGGCGACAGATCCTCCGGAACCTCTCCTTCATAGAAAAGCCGGGAGGCCGCCATTGCCAAACAGAGCTAGTGGCTTTAACGACGAGGCAGTAAACGCCGGCAACCAGTCGCCGCTGATTCCGGTTCCGCCACCGCCTCCGCCTTTCAAGATGCCGGCGATGAAGTTCGTGGTTCGCGGCGATTTCGTTAAAATACGTAGCAATCAGAGCTCGCGGTGCAGCTCGCCGGAGCGTGACGACATTGGTGTGTCATCATCAACATCAACCGTTGAGGAGTTAGAAACCACCGCAACCGTCAACAGCGTTTCTAACGCAGTTACAGATCGTAACGGTGAGGTGGGTGGTTCCGTTTTCTGTCCCAGCCCCGATGTGAACGTAAAAGCAGCAACTTTTATTGCTCGGCTGAGAGGGGAGTGGAAGCTGGAGAAGCTCAACTCCTTGAAAGAGAAAGGCAATGGCGCATTGCCTCTCAGAGGTCACGGCTTGTAA 1740 0.5707 MPYRRTWHSSPFMSPPVLIILLPIIALTLLFFAVPPLLSATTHVLRPSSVVKKSWDSLNILLVVFAILCGVFARRRDDESQHQDDAVQDRNAAFRKMPSEEGGGSYVSQQWFGFSEERKGYDPPPIQLQSPATGVTRLRRSSSSYPDLRNWETGDDRFRFRFFDDFEIDKQYRSPARDQVSTTVDLRTRTPAAEEGDAQVKEIPVDTFETRSSPPTPEPPPKTPAPPTPPPPPPPPPAESRRKPRRTYQKVDSVSEITELDDDREFTRIRSPPPAPPTPPPPAPVKTRSEHKHGRSERRKSSVKRDIATVWASVLSNQRKKKKKPRTKSDHTHHHYDNVIDELTNSSTMPPPSPAPPPPPPPPPPPPSVFHNLFRKGLGKSKKIHSVSAPPPPPPPPPLTSSRRWSRWKSAIPTPPPPATDPPEPLLHRKAGRPPLPNRASGFNDEAVNAGNQSPLIPVPPPPPPFKMPAMKFVVRGDFVKIRSNQSSRCSSPERDDIGVSSSTSTVEELETTATVNSVSNAVTDRNGEVGGSVFCPSPDVNVKAATFIARLRGEWKLEKLNSLKEKGNGALPLRGHGL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1537 579 MobiDBLite consensus disorder prediction 190 204 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 349 370 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 387 401 - -
Dod03g1537 579 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 3 567 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 213 238 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 485 506 - -
Dod03g1537 579 PANTHER COTTON FIBER (DUF761) 3 567 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 129 149 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 174 446 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 120 150 - -
Dod03g1537 579 PRINTS Proline rich extensin signature 224 245 - -
Dod03g1537 579 PRINTS Proline rich extensin signature 338 363 - -
Dod03g1537 579 PRINTS Proline rich extensin signature 269 286 - -
Dod03g1537 579 PRINTS Proline rich extensin signature 212 224 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 270 285 - -
Dod03g1537 579 MobiDBLite consensus disorder prediction 239 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1537 Dod-Chr3 20934471 20936937 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1537 - - ahf:112738300 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1537 03 20934471 20936937 Dod03g1537 03 20934471 20936937 ECH