Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1526 ATGGAGTGCGTTGGAGCAAGAAACTTCGCAGCAATGGCGGTTTGTTTAAGCGCTTCTTCCAGGCATCGTTTGCGGAGGAAGAAGCTCTCCAGAATGCGAACTTCGCTTTTGGTACACGGCATTTGTTTGCATCATCATCGTCGTCGTCGTCATGGTTCACGGTTGCATTGTGTGACAGTGGATGCGAGAGCTGGCTCGGGGAGCGAGAGCTGCGTGGCGACGAAGGAGGATTTCGCCGATGAAGAAGATTACGTTAAGGCCGGTGGCTCTGAACTCGTTTTCGTCCAAATGCAGCAGAATAAGCACATGGAAACGCAGTCCAAGCTTGCCGATAAGTTACCACCGATATCTTTAGGAGATGATACACTGGATCTAGTGGTGATTGGTTGTGGTCCAGCTGGTCTTGCTCTGGCTGCAGAATCTGGCAAGTTAGGATTGAAAGTTGGGCTTATTGGTCCGGATCTCCCTTTTACAAATAATTATGGTGTGTGGGAGGACGAATTTAAAGATCTTGGACTTGAAGGTTGTATCGAGCATGTTTGGAAGGATACCATTGTATATCTTGATAATATGGATCCCATTTTGATTGGACGTTCTTATGGACGCGTCAGTCGACATCTGCTTCATGAGGAACTGTTAAGAAGGTGTGTCGAGTCAGGTGTATCATATCTTAGCTCAAGAGTAGAAAGGATTGTTGAGGCAAGCAATGGCCTCAGTCATGTTGTCTGTGAATATGATATTGTTGTGCCCTGCAGGCTTGTTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTGTTGCAGTATGAGGTTGGGGGTCCAAAGGTGTCAGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAACTTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAATGTCTAGAAGCAAATTACCCAACATTTCTTTATGCAATGCCCATGTCTCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTGGCGTCAAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTCTTTTCAAGATTGAATACAATGGGGATCAGAATTACAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTACCCAACACAGATCAAAAGAACCTTGCATTTGGTGCAGCTGCCAGTATGGTGCATCCAGCTACAGGTTACTCAGTTGTGAGATCCTTGTCAGAAGCTCCAAAATATGCTTCTGTAATTGCTACTATCTTGAAAGAGGGCCATGCAAGGAACATCATTACTCATGAAAGAAGTAGGGTAAATCTATCTATGCAAGCTTGGAATACACTTTGGCCGCAAGAAAAGAAACGACAGAGAGCATTCTTTCTATTTGGATTAGCATTAATCCTGCAGCTGGACATTGAGGGCATTAGAACATTCTTTCGCACTTTCTTTCGCTTACCTAATTGGATGTGGCAAGGATTTCTTGGCTCCTCTCTCTCTTCTACAGACCTTGTGCTGTTTGCATTCTATATGTTCATAATAGCACCAAATGACTTGAGAATGTGTCTGGTCAGACATCTGCTTTCAGATCCTACAGGGGCGACTATGATAAGGACCTACTTAACGATATAA 1635 0.4373 MECVGARNFAAMAVCLSASSRHRLRRKKLSRMRTSLLVHGICLHHHRRRRHGSRLHCVTVDARAGSGSESCVATKEDFADEEDYVKAGGSELVFVQMQQNKHMETQSKLADKLPPISLGDDTLDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNMDPILIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVERIVEASNGLSHVVCEYDIVVPCRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQNVQCLEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKEGHARNIITHERSRVNLSMQAWNTLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFRTFFRLPNWMWQGFLGSSLSSTDLVLFAFYMFIIAPNDLRMCLVRHLLSDPTGATMIRTYLTI* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1526 544 PANTHER - 5 503 - -
Dod03g1526 544 SUPERFAMILY FAD/NAD(P)-binding domain 120 517 IPR036188 -
Dod03g1526 544 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 5 503 - -
Dod03g1526 544 PRINTS Pyridine nucleotide disulphide reductase class-I signature 254 263 - -
Dod03g1526 544 PRINTS Pyridine nucleotide disulphide reductase class-I signature 124 146 - -
Dod03g1526 544 TIGRFAM carotene-cycl: lycopene cyclase family protein 124 523 IPR010108 GO:0016117|GO:0016705
Dod03g1526 544 Pfam Lycopene cyclase protein 124 521 - -
Dod03g1526 544 Gene3D - 120 470 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1526 Dod-Chr3 20793506 20799931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1526 K06444 - gmx:100790686 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1526 03 20793506 20799931 Dod03g1526 03 20793506 20799931 ECH