Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1480 ATGATTAAAGGTAAGGACGTATATGAAGTTCTATCAGCTCTTGTGCCTCTATATGTGGCCATGGTGTTAGGCTTTGGCTCAGTTAGGTGGTGGAAGATTCTCACACCAGAACAGGGCTCTGGCATAAGCCGATATGTTGCTGTTTTTGCTGTCCCTTTTCTTTGTTTCAATTTAATATCCTCCAACGACATCTATGCCATGAACTTCAAGTTCCTAGCCGGCGACTCCCTCCAGAAAGTTGTGATCTTGATCGCACTTTTCCTTTGGAACATGACAAGGTTTGGGAGCCTTGATTGGAGCATCACCCTCTACTCACTTTTAACAATGCCAAACACCCTTGTGATGGGGATCCCTCTCTTGAAGGCCATGTATGGTGATTCCTCAGCAAGCCTCATGGTCCAAATTGTGGTCTTGCAAACATGCATATGGGCCACAATCTTGCTTGTCTTGTTTGAGTATAGGGGTGCCAAGCTCCTTATTCAAGAGCAATTCCCTGAGACTGCAGGGTCAATTTCAACACTCAAGGCTGATTCTGATGTTAACTCTCTAAGTGGTAGGGAGCCCCTTCAGGCAGATGCAGAGATTGGACAGGATGGGAAGCTCCATGTTGTGGTGAGAAGATCATATTCTACATCTATGGTATCCAACAATTCATTCAATAGGTCACAATATTTTCCTTCTGTGACACCTAGAGCATCAAGTCTTTCTCGGGTTGAGATATATTCTGTCCACTCATCAAGAGAACCAACCCCAAGAAACTCAAGCTTTGGCGGCCAAATAAATATGCAAAGAAGTAATTCAACAAATGTTGGTTTGGCTCATACTCCAAAACCAGTGCTTTCAGGGTCTGCTAGTATTGGAAGCCAGAGAAAGAGAGATAGCATGGGTGGTGGTGCACCGGGCAGGGAGTTAAACATGTTTGTTTGGAGCCCAAGTGCATCACCAGCTTATGATGAGAACAGAAGACATCACGGAGTGAATAGGGGTGCCTCTTCTGACATTGGGACCATTAATCATTCCCAGGTTGTTGATGTTCCACACGAAATTGCTCCCTCGAGAGAAGCGCATGAATTGATTGTAACTGAAGAAAAAGGCACATATCCTTTAAGTGGGAACCGGAAGATGGTTGACATTGAAGAAGGCGATGGAGACAAAAAGCAACAGATGCCATCTGCTAGTATCTTTACAAGGCTCATTCTCATCACGGTATTTAGGAAGCTCATTAGAAATCCTAATATATGGGCAAGTATTTTGGGCATAACGTGGTCTCTCATAGCATTCAGGTTTAACATCAAAATGCCGACTATTGTTAAAAGTTCCATCACAATAATGTCTAATACCGGGATGGGAATGGCCACATTCAGTCTAGGTATGTTCATGGCATTACAACCCAAGCTCATTGCTTGTGGAAAAAAGCGGGCAGCAATTTCTTTTGCAGTTAGGTTTTTGGGTGGTCCAGCAGTGATTGCTGCATGCTCCGCGGCAATTGGCATCCGTGGAGTCCTTTTACAAGTTGAAATTGTTCAGGCTGCTCTTCCTCAAGCGATAGTTTCCTTTGTATTCGCTAAAGAATACAATCTACATGCAGATATATTCAGCACCGCGTGA 1608 0.4403 MIKGKDVYEVLSALVPLYVAMVLGFGSVRWWKILTPEQGSGISRYVAVFAVPFLCFNLISSNDIYAMNFKFLAGDSLQKVVILIALFLWNMTRFGSLDWSITLYSLLTMPNTLVMGIPLLKAMYGDSSASLMVQIVVLQTCIWATILLVLFEYRGAKLLIQEQFPETAGSISTLKADSDVNSLSGREPLQADAEIGQDGKLHVVVRRSYSTSMVSNNSFNRSQYFPSVTPRASSLSRVEIYSVHSSREPTPRNSSFGGQINMQRSNSTNVGLAHTPKPVLSGSASIGSQRKRDSMGGGAPGRELNMFVWSPSASPAYDENRRHHGVNRGASSDIGTINHSQVVDVPHEIAPSREAHELIVTEEKGTYPLSGNRKMVDIEEGDGDKKQQMPSASIFTRLILITVFRKLIRNPNIWASILGITWSLIAFRFNIKMPTIVKSSITIMSNTGMGMATFSLGMFMALQPKLIACGKKRAAISFAVRFLGGPAVIAACSAAIGIRGVLLQVEIVQAALPQAIVSFVFAKEYNLHADIFSTA* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1480 535 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 267 IPR033526 GO:0010315|GO:0010329
Dod03g1480 535 TIGRFAM 2a69: auxin efflux carrier 1 535 IPR014024 -
Dod03g1480 535 MobiDBLite consensus disorder prediction 268 302 - -
Dod03g1480 535 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 273 535 - -
Dod03g1480 535 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 267 - -
Dod03g1480 535 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 273 535 IPR033526 GO:0010315|GO:0010329
Dod03g1480 535 Pfam Membrane transport protein 10 535 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1480 Dod-Chr3 19669033 19698766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1480 1 535 Organic Solute Cotransporters AT1G73590 47.549 3.96e-173 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1480 K13947 - gmx:100305383 620.928