Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1479 ATGAATTTCAAGTTCCTAGCCGGTGACTCCCTCCAAAAAGTTGTGATCTTGATTGCACTTTTCCTATGGAACATAACAAGGTTTGGGAACCTTGATTGGAGCATAACCCTTTTCTCACTTTTAACTATGCCAAACACCTTTGTGATGGGGATCCCTCTCTTGAAGGCCATGTATGGTGATTTCTCAGCAAGCCTAATGGTCCAAATTGTGGTCTTGCAAACATGCAAATGGACCACACTCTTGCTGTTCTTGTTTGAATATAGGGGCGCAAAGCTCCTTATTCAAGAACAATTCCCTGAGACTGCAGTGTCAATTTCAACACTCAAGGCTGATTCTGATGTTAGCTCTCTCAGTGGGAGGGAGCCCCTTCAAGCAGATGCAAAGATTGGACAAGATGGGAGGCTTCATGTTGTGGTGAGAAGATCAAATTCTACCTCTATGGTGTCCAACAATTCATTCAATAGGTCACAATATTTTCCTTCTTCTGTGACACCCAGAGCATCAAGTCTTCCTGGGGTTGAGATATATTCTGTCCACTCATCAAGAGAACCAACCCCAAGAAACTCAAGTTTAATTTTAGCAACCAAATAG 591 0.4264 MNFKFLAGDSLQKVVILIALFLWNITRFGNLDWSITLFSLLTMPNTFVMGIPLLKAMYGDFSASLMVQIVVLQTCKWTTLLLFLFEYRGAKLLIQEQFPETAVSISTLKADSDVSSLSGREPLQADAKIGQDGRLHVVVRRSNSTSMVSNNSFNRSQYFPSSVTPRASSLPGVEIYSVHSSREPTPRNSSLILATK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1479 196 Pfam Membrane transport protein 1 182 IPR004776 GO:0016021|GO:0055085
Dod03g1479 196 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 191 - -
Dod03g1479 196 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 191 IPR033526 GO:0010315|GO:0010329
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1479 Dod-Chr3 19661134 19661724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1479 1 191 Organic Solute Cotransporters AT1G73590 63.021 6.03e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1479 K13947 - mnt:21399861 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1479 03 19661134 19661724 Dod03g1479 03 19661134 19661724 ECH
Dod05g2311 05 49399149 49402774 Dod03g1479 03 19661134 19661724 PCT