Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1476 ATGATGTACGAATTGAAACAGGAGCAGCAGCATCGGCAGCCGATGATGAAGATGGATATGAGGAGGAATGGGGAGAGGAACAAAGACAAGAAGGAGGAAGAGAAGCTTCAAATAGTTGACTTGAGTTGCATGTCCTTGGAGTCTCTTCCCATACCTACTCTTGACTTACCTACCATTTCCAACTTGGACCTTTCTAACAACAATCTCCAGAACATTCCGGAGTCGTTAACGGCGAGGCTACTGAACTTGGTGGTGTTGGACGTGCACTCCAACCAGCTCAGGTCCCTCCCCAATTCCATTGGTTGCCTCTCTAAGCTCAAGACTTTGAACGTCTCTGGAAACTTCATCGAATCCCTCCCCCAAACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCCAACTTTAACAAGCTAAGCAAGCTGCCAGACACAATAGGGTTTGAGCTCATAAACCTCAAGAAACTTTCAGTCAACTCCAACAAGCTGGTGTTCCTTCCAAGCTCCACCTCTCACCTAACAGCCTTAAAGGTTCTAGACGCACGCCTGAACTGCTTAAGGTCTCTCCCTGAGGACCTTGAGAACCTCATCAACCTTGAGACCTTAAATGTGAGCCAAAACTTCCAGTACCTTGAAACCCTGCCCTACTCCGTAGGGCTCCTCTTGTCCCTAGTTGAACTTGATGTCAGCTACAACAGCATCAAGACCTTGCCTGACTCCATTGGATGCCTCAAGAAGCTCCAGAAGCTAGGCTTGGAAGGGAACCCGCTGAGTTCGCCGCCGTTGGAGGTGGTGGAGCAAGGACTAGACGTGGTGAAGGAGTACATGTGGCACAAGATGAACAACTCATCAGGCCAACAAAGCCAACACAAGAAGAAGAAGGGGTGGGTGGGGAAGTTGGTGAAGTGTGGGCCATTCCATGGACACATGAGAAGTGGTAAGCGACCACAGCATGAGGGTTCCAGCAAGCTCCGGTATCAGTCCATCGATGGCCTTGCGTCGCCAGGGTTCTTGGGGATCTTCTCACCTCTTCGCATCTTCTCACCCCGTCGTTCCTTCAGTTGA 1065 0.4977 MMYELKQEQQHRQPMMKMDMRRNGERNKDKKEEEKLQIVDLSCMSLESLPIPTLDLPTISNLDLSNNNLQNIPESLTARLLNLVVLDVHSNQLRSLPNSIGCLSKLKTLNVSGNFIESLPQTIENCRALEELNANFNKLSKLPDTIGFELINLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRSLPEDLENLINLETLNVSQNFQYLETLPYSVGLLLSLVELDVSYNSIKTLPDSIGCLKKLQKLGLEGNPLSSPPLEVVEQGLDVVKEYMWHKMNNSSGQQSQHKKKKGWVGKLVKCGPFHGHMRSGKRPQHEGSSKLRYQSIDGLASPGFLGIFSPLRIFSPRRSFS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1476 354 ProSiteProfiles Leucine-rich repeat profile. 105 126 IPR001611 GO:0005515
Dod03g1476 354 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Dod03g1476 354 Pfam Leucine rich repeat 58 114 IPR001611 GO:0005515
Dod03g1476 354 Pfam Leucine rich repeat 221 257 IPR001611 GO:0005515
Dod03g1476 354 Gene3D Ribonuclease Inhibitor 2 148 IPR032675 -
Dod03g1476 354 Gene3D Ribonuclease Inhibitor 149 277 IPR032675 -
Dod03g1476 354 ProSiteProfiles Leucine-rich repeat profile. 58 79 IPR001611 GO:0005515
Dod03g1476 354 SUPERFAMILY L domain-like 35 262 - -
Dod03g1476 354 ProSiteProfiles Leucine-rich repeat profile. 82 103 IPR001611 GO:0005515
Dod03g1476 354 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 2 348 - -
Dod03g1476 354 MobiDBLite consensus disorder prediction 10 34 - -
Dod03g1476 354 SMART LRR_bac_2 173 192 - -
Dod03g1476 354 SMART LRR_bac_2 103 122 - -
Dod03g1476 354 SMART LRR_bac_2 126 145 - -
Dod03g1476 354 SMART LRR_bac_2 80 99 - -
Dod03g1476 354 SMART LRR_bac_2 196 217 - -
Dod03g1476 354 SMART LRR_bac_2 56 75 - -
Dod03g1476 354 SMART LRR_bac_2 150 169 - -
Dod03g1476 354 SMART LRR_bac_2 221 240 - -
Dod03g1476 354 MobiDBLite consensus disorder prediction 1 34 - -
Dod03g1476 354 SMART LRR_typ_2 103 126 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 150 172 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 127 149 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 56 79 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 244 267 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 80 102 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 173 196 IPR003591 -
Dod03g1476 354 SMART LRR_typ_2 221 243 IPR003591 -
Dod03g1476 354 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1476 Dod-Chr3 19618704 19623035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1476 54 343 Receptor kinase-like Gene Family AT5G51350 31.000 1.01e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1476 - - gmx:100775711 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1476 03 19618704 19623035 Dod03g1476 03 19618704 19623035 ECH
Dod05g2309 05 49386292 49390935 Dod03g1476 03 19618704 19623035 PCT