Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1415 ATGCAGTTCTCCTCAATCTGTTTGCCAGCCAAGGTTCCGGTTCGCGTGAAGTCATCACTGCACACGAACCCAACAACCGTGAAGGACCCCAGCAACATGGCTGTGGTGGCTGCTCCTAAGTGGGCCCAGAAGACTATGACTTTGCCTCCACAGAAACGTGGCTGTCATCTCATAACTTCTAAGATAGTGAAGGAAATTGAGCAAGATTTGTCTGGATTCAAGTGTGGCCTAGCTCATCTCTTCTTGCATCACACAAGTGCTTCTCTTACCATCAATGAGAATTATGACTATGATGTTCGGGATGACACAGAAACATTCCTCAATAGGATAGTTCCAGAGGGGCCATCTGCACCTTGGAAGCATACTCTAGAAGGCCCAGATGACATGCCAGCGCATATTAAATCATCGATGTTTGGTTGTGCACTCACGATACCGATTACAAATGGAAAGCTTAACATGGGGACATGGCAGGGTATATGGCTTTGTGAGCATCGGGATTATCCTACATCACGTACAGTTGTGGTCACTCTTAATGGAATATGA 543 0.4641 MQFSSICLPAKVPVRVKSSLHTNPTTVKDPSNMAVVAAPKWAQKTMTLPPQKRGCHLITSKIVKEIEQDLSGFKCGLAHLFLHHTSASLTINENYDYDVRDDTETFLNRIVPEGPSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKLNMGTWQGIWLCEHRDYPTSRTVVVTLNGI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1415 180 PANTHER - 18 180 - -
Dod03g1415 180 Pfam Uncharacterised protein family UPF0047 58 176 IPR001602 -
Dod03g1415 180 Gene3D - 32 179 IPR035917 -
Dod03g1415 180 TIGRFAM TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 44 179 IPR001602 -
Dod03g1415 180 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 18 180 IPR001602 -
Dod03g1415 180 SUPERFAMILY YjbQ-like 41 179 IPR035917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1415 Dod-Chr3 18352137 18358448 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1415 - - gmx:100500593 336.65