Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1412 ATGCAAATCTCAAGTAAAAGATTCGAACGAGCTCCAAGTATTCGGCAGCTATTTCCACCTAAAAATCATGATGGAACTAGCAGTTGTGAGGCGTGTTCTGTTCAGTTCATCAACCCCCAATGTCATATATCAGAAAATCAAACCCATCAATGCTATAGTTCAAAACCACTTCTGCTAGAAGATGTGGCTCGAACCCCAGGATATTCCATATCTTCTATTCCATCCCATGGCATGGAAGATACTGTATCGATGTGTGAACCGGTTGATCGATCAAGTACTTCTGTGGTTCCATCTATTCAGTTTGAGCATGTTACTTCTTCGGAGTCCACACCAAGTTCATTTCCAGTCTTTGGAGAAAAAGTACCAATGAATCTTCACATCTATTTGCCCTTATATAGAGCTGCACTGAAAGGTGATTGGGATGAGGCCCTTGAGTTCCTTAATTTGCATCCTGGTGCAGAATTTGCCAGGATTTCAAGAGGGTGGGAAACCGCTCTTCATATTTCAGCTGGTGCTAGGCACACCAAATTTGTGGAGGAACTGATCAAAAGAATGAGAACTAGGGACTTGGAAATTCAAAATAAGGATAACAATACTGCACTTTGCTTTGCTGCTGCATCTGGGATTACCAGGATTGCAAGGCTGATGGTGGAAAAGAATAGAAACCTACCTGCAATACGAGGTAGTGAAGGGGTGACACCACTTTATATTGCTACATTACTGGGCCAAGGGGATATGGTTTGGTATCTGGACTCGGTGACTAATCATGAGGATCTTAAAATAGAAGACCACTTCAGCCTATTGATTGCTTCTATATCTTCAGATTTATACGATTTTGCCTTTCATTTACTGGAGCATCAGCCACAATTGGCGACATATCATGGTTTGAATGGGGAGACAGCCCTGCATGTGTTGGCAAAAAAGCCTTCATCCTTTACCAGTGGCATTCAACTAGGAATGTGGGAAAGATGCATCTATCCATGGATCCAAGTCAAGCTAACAAATGACTTCAGATGTCTGTATAACAACCCACAGTCTCAGGCAGCTTCAACATTTCAAGTTGCAGATAACCTATCGTTGGCAAGACTCTGGCGTGCTATGAAATATGTTGTGCCAGGATTTGAAGCAGTTCAGAAGAAAAAGATATTGAATTTACTAGCTGTAAAGCTAGTTCAACGGCTTTGGGAACTAACAGTGTCTTCAGATGAAAAACAGCTTGGGGACTTAACTAAAAGCCCTTTGTCAAGACCACTATTTATTGCTGCAGAATTTGGGATTCCTGAGATTGTAGTTGAGCTTCTTTATTCATATCCTGATCTACTATGGAAAGTCGATAGCCAAAACAGAAGCCTTTTCCACATTGCAATCATGTATCGTCAGGAAAAAATATTCAACCTGATTTATGACATAGGGGCACATAAGGATATAATAACATCTTACAGAGACAGTAACAATCACAGCATACTGCATCTGGCTGGAAAGTTGGCCCCTTCGGATCAACTTCATGTTGTATCTGGTGCTGCACTTCAGATGCAAAGGGAATTATTATGGTTCAAGGCAGTGGAGAAGATTGTGCAGCCTCTATTCAAGGATATCAAAGACTCCAAAGGCAGAACACCTCAAATGTTGTTCACTGAGGAACACAAGGGGTTGGCCAAAGAAGGAGAAAAGTGGCTGAAGAGCACTGCTTCATCGTGCATGTTAGTCGCAACGCTCATCACCACCGTGATGTTTGCAGCAATCTTTACAGTGCCCGGTGGGAACAACAACAACAACGGCCGCCCTACTTTCCTGCATACCACATCCTTCAAAGTTTTTGCTATCTCAGATGCTCTTGCATTGTTCTCTTCCGTAATATCTGCATTGATGTTTTTGTCCATACTCACCTCGAGGTATGCACAGGAGGATTTCCTTGTGTCATTGCCAAAACGGTTGTGTGTAGGCATGGTAACACTTTTCTTCTCCATCATTACTATGCTTATAGCTTTTGGTGCAACATTCTTCATTGTTCTCGGCCATCAATTGGCGTGGATTGTCATTCCAACAACCCTTGTTGCTTGTATCCCAGCAATATTGTTTGCTTTTCTACAGTTTCGACTTCTTCTTGATACAATCTCTTGGACATATGGAGCAGGCATATTTACTCATTCAGGAAAATAG 2160 0.4204 MQISSKRFERAPSIRQLFPPKNHDGTSSCEACSVQFINPQCHISENQTHQCYSSKPLLLEDVARTPGYSISSIPSHGMEDTVSMCEPVDRSSTSVVPSIQFEHVTSSESTPSSFPVFGEKVPMNLHIYLPLYRAALKGDWDEALEFLNLHPGAEFARISRGWETALHISAGARHTKFVEELIKRMRTRDLEIQNKDNNTALCFAAASGITRIARLMVEKNRNLPAIRGSEGVTPLYIATLLGQGDMVWYLDSVTNHEDLKIEDHFSLLIASISSDLYDFAFHLLEHQPQLATYHGLNGETALHVLAKKPSSFTSGIQLGMWERCIYPWIQVKLTNDFRCLYNNPQSQAASTFQVADNLSLARLWRAMKYVVPGFEAVQKKKILNLLAVKLVQRLWELTVSSDEKQLGDLTKSPLSRPLFIAAEFGIPEIVVELLYSYPDLLWKVDSQNRSLFHIAIMYRQEKIFNLIYDIGAHKDIITSYRDSNNHSILHLAGKLAPSDQLHVVSGAALQMQRELLWFKAVEKIVQPLFKDIKDSKGRTPQMLFTEEHKGLAKEGEKWLKSTASSCMLVATLITTVMFAAIFTVPGGNNNNNGRPTFLHTTSFKVFAISDALALFSSVISALMFLSILTSRYAQEDFLVSLPKRLCVGMVTLFFSIITMLIAFGATFFIVLGHQLAWIVIPTTLVACIPAILFAFLQFRLLLDTISWTYGAGIFTHSGK* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1412 719 MobiDBLite consensus disorder prediction 1 24 - -
Dod03g1412 719 Pfam Ankyrin repeats (3 copies) 131 220 IPR002110 GO:0005515
Dod03g1412 719 Pfam Domain of unknown function 556 669 IPR026961 -
Dod03g1412 719 Gene3D - 123 318 IPR036770 -
Dod03g1412 719 PANTHER CASKIN 124 718 - -
Dod03g1412 719 SUPERFAMILY Ankyrin repeat 130 493 IPR036770 -
Dod03g1412 719 PANTHER ANKYRIN REPEAT PROTEIN 124 718 - -
Dod03g1412 719 Gene3D - 381 552 IPR036770 -
Dod03g1412 719 SMART ANK_2a 263 292 IPR002110 GO:0005515
Dod03g1412 719 SMART ANK_2a 230 261 IPR002110 GO:0005515
Dod03g1412 719 SMART ANK_2a 447 476 IPR002110 GO:0005515
Dod03g1412 719 SMART ANK_2a 161 192 IPR002110 GO:0005515
Dod03g1412 719 SMART ANK_2a 196 225 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1412 Dod-Chr3 18324957 18329606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1412 408 688 Miscellaneous Gene Families AT3G12360 24.691 1.38e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1412 - - gsj:114366966 1156.35