Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g1385 | ATGGAAGAAGTCGAAGAGCAGTGTGAAGTTGAGAATGAGAATGAGAATGAGAATGAAGCTTGCAACAGCGAGAATAAACCCGTTCGTGTATATGCTGATGGCATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAACAGGCCAAGAAACTGTTTCCAAACACATATCTGCTTGTTGGATGCTGCAATGATGAGACCACTCACAAGTATAAGGGAAAAACTGTCATGACTGACAAGGAACGCTATGAGTCTCTTCGCCACTGCAGGTGGGTCGATGAAGTTATTCCAGATGCACCATGGGTAATCACACAGGAGTTCCTTGACAAGCATCAAATTGACTATGTTGCTCATGATTCTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGACGTCTATGAATATGTTAAGTCTATTGGAAAATTTAAGGAAACAAAGCGGACTGAAGGAATTTCTACTTCAGATATCATAATGAGAATTATCAAAGATTATAATCAGTATGTAATGCGTAACTTGGACCGTGGGTATACAAGGAAGGATTTGGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAATATGGGACTTAAAAAATTGCACGAGAGAGTGAAGAAACAGCAAGAGAAAGTGGGAGAGAAGATACAAATAGTAGCAAAAACAGCAGGGATGCACCGAAATGAATGGATCGAAAATGCTGATCGATTGGTCGCCGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATCAGAGACAGGATTCAAGAACGACTGAGGACACAGCAGCTAAAGTCTCTTCTTTATGATGAGTGGGAAGATGATGATGAATTTTATGATGATGAATCTTCAGAATACTACAGTGACTAA | 888 | 0.411 | MEEVEEQCEVENENENENEACNSENKPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDETTHKYKGKTVMTDKERYESLRHCRWVDEVIPDAPWVITQEFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRMNMGLKKLHERVKKQQEKVGEKIQIVAKTAGMHRNEWIENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRTQQLKSLLYDEWEDDDEFYDDESSEYYSD* | 296 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g1385 | 295 | Pfam | Cytidylyltransferase-like | 31 | 160 | IPR004821 | GO:0003824|GO:0009058 | |
| Dod03g1385 | 295 | CDD | CCT | 26 | 177 | IPR041723 | - | |
| Dod03g1385 | 295 | PANTHER | CYTIDYLYLTRANSFERASE | 10 | 293 | IPR045049 | GO:0004105|GO:0006657 | |
| Dod03g1385 | 295 | PANTHER | CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 | 10 | 293 | - | - | |
| Dod03g1385 | 295 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Dod03g1385 | 295 | TIGRFAM | cyt_tran_rel: cytidyltransferase-like domain | 29 | 96 | IPR004821 | GO:0003824|GO:0009058 | |
| Dod03g1385 | 295 | Gene3D | HUPs | 1 | 248 | IPR014729 | - | |
| Dod03g1385 | 295 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Dod03g1385 | 295 | SUPERFAMILY | Nucleotidylyl transferase | 29 | 161 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod03g1385 | Dod-Chr3 | 17842554 | 17849692 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod03g1385 | 54 | 293 | Acyl Lipid Metabolism Gene Families | AT2G32260 | 74.803 | 7.90e-136 | 384 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g1385 | K00968 | - | gmx:100786249 | 486.108 |