Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1383 ATGAGATTCTCAATCTTAGCCTTCCTCATATTATTGGTGGTACAAGAAGCCACTTGCTTCAATCAACGTATAGAGGTAGAGATATCTCATTTCAGGAAAAGGCTTGAGGATAGAGTAGCAAATTCCATGTCCCAACCACCATCTGCATCCTCACAAACAAGGAAAGGAAGAGTGCTGTTCCCAGCAGATTATGGGGCAGACCCAAGTGGGGAAGTTGACAGCAGTGATGCAATTGTGAAGGCAGTGGGGGATGCATATGAGATGGAGAGTGGGCTTCAGATGCTGCCAGGAGTAAGAGACCTTGGAGGTGTTGTGATTGATCTGGAAGGTGGAAACTACAAGATCAGCAAACCCATCACATTCCCTTCTGGTGGTGGCAACATTTTGGTGGAAGGAGGAACCTTGAGAGCTTCTGATGCATTTCCAACTGATAGGCATCTAGTTGAGTTATGGGCATCAAATTCCCAAAAGCTACAAAAGACAACATCATCCATGCACCACCAACATTATGAATTCAACAGCAGCAAACTCCAGCAACCTATTGGAATTTACTATGAAGACATAACATTCCGCGACATCCTCTTCGATTCGAGCTACCGCGGCGGCGGGATCTTCATCGCCGATTCCGCCAGGATCAGGATCAACAACTGCTTCTTCCTCCATTTCACCACAGAAGGAATCCTAGTCCAAGGCGGTCACGAGACATTCGTGTCGAACTGCTTCCTTGGGCAGCACTCAACCGTTGGTGGAGACAAAGGCGAGAGGGAATTTTCAGGAACCGCAATTGACCTCGCCAGTAATGACAATGCAGTCACTGATGTCGCGATTTTCTCGGCAGCCATTGGAATTGTTCTTAGAGGCCAAGCTAACATAATAACTGGGGTGCATTGTTACAACAAGGCCACAGGTTTTGGTGGCATAGGAATTTTGGTGAAGCTAGCAGGGAATTCTCAAACCAGAATTCACAATTGTTACATGGATTATACGGGAATTGTCATGGAAGACCCGGTTCAAGTTCATGTCACCAATGGGTTTTTCTTAGGGGATGCTAACGTTGTTTTGAAATCAATCAAGGGACAGATTTCAGGAGTGAACATAGTTGATAATATGTTCACTGGGAACCCCAAGAATAATGTTCCAATTGTAACCCTTGAAGGAGAATTCAGTGACATTGATCAAGTGGTGACTGATAGGAACAGTGTGGATGGCATGAGCTTGAGATCAACGGTTGGGAAGTTATCTGTGGCTGCAGACGGTACAACTACAAACTGGGTGGCTGATTTTTCTAACATTTTGCTGTTCCCTAGTCGGATTAGCCACTTTCAGTATTCATTTTATTCACAAGGGGAGCCCAAGTTTGTGGCACATTCGGTGACTAATGTGTCCAATAATGTAGTAGTTGTGGAAAGTGAGAAACCAGTTAAAGGGGTTGTTTCCTTCTTGGTTGAACAATGA 1455 0.4502 MRFSILAFLILLVVQEATCFNQRIEVEISHFRKRLEDRVANSMSQPPSASSQTRKGRVLFPADYGADPSGEVDSSDAIVKAVGDAYEMESGLQMLPGVRDLGGVVIDLEGGNYKISKPITFPSGGGNILVEGGTLRASDAFPTDRHLVELWASNSQKLQKTTSSMHHQHYEFNSSKLQQPIGIYYEDITFRDILFDSSYRGGGIFIADSARIRINNCFFLHFTTEGILVQGGHETFVSNCFLGQHSTVGGDKGEREFSGTAIDLASNDNAVTDVAIFSAAIGIVLRGQANIITGVHCYNKATGFGGIGILVKLAGNSQTRIHNCYMDYTGIVMEDPVQVHVTNGFFLGDANVVLKSIKGQISGVNIVDNMFTGNPKNNVPIVTLEGEFSDIDQVVTDRNSVDGMSLRSTVGKLSVAADGTTTNWVADFSNILLFPSRISHFQYSFYSQGEPKFVAHSVTNVSNNVVVVESEKPVKGVVSFLVEQ* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1383 484 Gene3D - 62 471 IPR012334 -
Dod03g1383 484 PANTHER POLYGALACTURONASE QRT3 1 484 IPR039279 GO:0004650
Dod03g1383 484 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 1 484 - -
Dod03g1383 484 SUPERFAMILY Pectin lyase-like 46 382 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1383 Dod-Chr3 17830058 17835997 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1383 - - gmx:100802482 720.309