Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1382 ATGGCCTCAAACTCCATGGCTGGCTTGATCACCGGCTCTCATTCTCATTCTCATCTCTCACATGACTCTGATGAGCATCAGCCACCTAACCATCAGTCCTCATCAAAAACATGTCGAGTTTGCGGTGATGAGATTGGATATAAGGAAGATGGGGGGCTGTTTGTGGCATGTCATGTGTGTGGATTTCCTGTTTGTCGACCCTGCTATGAGTATGAGAGGAGTGAAGGGAACCAATGCTGCCCTCAATGCAACACGCGCTATAAGCGCCACAAAGGTTGTCCTAGAGTTGTTGGAGATGAAGAGGAGAATTTTGATGCTGAAGATTTTGATGATGAATTTCAGACTAAGAATCATGATGATGATGCAGATAGGCAACATGCTGCTAATCATTTGGAAAATGGAGATTACAATCAACAGAAATTGCATACAAATGGTCAAGCTTTCTCTTCTGCCGGAAGTGTTACTGGCAAGGATTTCGAAGCGGAGAAAGAATTTTACAGTAATGAAGAATGGCAGGAAAGAGTAGAGAAATGGAAAGTCAGGCAAGAAAAGAAAGGTCTGCTAAACAAAGAGGACGGAAAAGAAGACCAAGGTGAAGATGATGATTACCTTTTGGCTGAAGCTAGGCAACCACTTTGGCGCAAGGTTCCAATACCTTCAAGCCTTATCAACCCGTACCGCATAGTCATCGTCATGAGGCTCGTCATCCTGGCATTCTTCTTCCGTTTCCGTATCTTAACTCCAGCATACGATGCATACCCCTTGTGGCTCATCTCTGTGATATGTGAGATATGGTTTGCACTGTCATGGATACTTGACCAGTTCCCCAAGTGGTTTCCCATCACACGTGAGACTTACTTGGACCGCTTGTCCATAAGGTTCGAGCGTGAAGGGGAGCCTAATCAGTTATGCCCAGTTGATATCTTTGTGAGTACTGTGGACCCTTTGAAGGAACCACCAATCATAACAGCAAACACTGTTCTGTCAATCCTTTCTGTTGACTATCCTGTTGAGAAGGTGTGCTGCTATGTGTCAGATGATGGTGCATCTATGCTTTTGTTTGATTCGTTGGCAGAAACTGCTGAGTTTGCAAGGAGATGGGTTCCCTTTTGCAAGAAGTATAACATAGAGCCAAGGGCTCCCGAGTTCTATTTCTCTCAGAAGATTGATTACTTGAAGGATAAGGTTCAGCCTACGTTTGTGAAGGAGCGAAGGGCCATGAAGAGAGAGTATGAAGAATTCAAAGTGAAAATCAATGCTTTGGTGGCAAAGGCTCAGAAGAAACCAGAGGATGGGTGGGTGATGCAGGATGGAACTCCGTGGCCCGGCAACAACACTCGTGATCATCCAGGAATGATTCAGGTATATTTGGGAAGTGCTGGTGCACTTGATGTGGAAGGAAAGGAACTGCCACGACTTGTGTATATTTCCCGTGAAAAACGTCCTGGCTATCCACACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCTTTCATGTTGAATCTGGATTGTGACCACTACATCAATAATAGCAAGGCGTTAAGAGAGGCTATGTGCTTTTTAATGGACCCACAGCTTGGGAAGAAGCTCTGTTATGTCCAATTCCCACAAAGATTTGATGGTATTGATCGCCATGATAGATATGCTAATCGCAACACCGTGTTCTTTGATATCAATATGAAAGGGCTTGATGGGATTCAAGGTCCAGTATATGTTGGTACCGGAACTGTTTTCAACAGGCAGGCACTGTATGGTTATGATCCACCAGTATTTGAGAAAAGGCCGAAGATGACCTGTGACTGTTGGCCATCATGGTGTTGCTTTTGTTGTGGTAAAAGGAAATCCAAGTCAAAAAAGAAATCAGGAAGAGGTCTCTTTAGTGCCTTATACACAAAGAAGAAGAAAATGATGGGGAAAGACTATGTTAGAAAAGGGTCTGGGTCCATGTTTGATCTTGAAGAGATTGAAGAAGGCCTTGAAGGTTATGAGGAGCTAGAGAAATCATCCCTCATGTCCCAGAAAAGCTTTGAGAAGCGATTCGGGCAGTCACCGGTTTTCATTGCTTCGACTTTGATGGAAAATGGAGGACTTCCTGAAGGCACCAATACTCAATCATTGGTGAAGGAGGCCGTTCATGTTATAAGCTGTGGCTATGAAGAGAAGACTGAATGGGGCAAAGAGATTGGGTGGATTTATGGCTCTGTCACAGAAGATATTTTGACTGGATTTAAGATGCACTGCAGAGGATGGAAATCAGTATATTGCATGCCAAAGAGAGCAGCTTTCAAGGGATCTGCACCAATAAATCTATCGGATAGGTTGCACCAAGTTCTGCGATGGGCTCTTGGTTCTGTCGAGATTTGCCTTAGTCGCCACTGTCCATTATGGTATGGCTATGGAGGAAAGCTCAAGTACCTAGAGAGGCTGGCTTACACTAACACTATAGTTTATCCATTCACTTCCATCCCTCTGCTTGCATACTGCACAGTTCCTGCTGTGTGTCTCCTTACTGGAAAGTTCATCATTCCCACACTGACCAACCTTGCTAGTGTTTGGTTTATGGCTCTATTTATCTCCATCATTTTAACTGGTGTGCTTGAGCTCCGATGGAGTGGCGTCACCATCGTAGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGAGGTGTTTCTGCACACCTTTTCGCTGTGTTTCAAGGCCTCCTCAAAGTTCTTGCTGGAGTAGACACCAACTTCACTGTCACAGCAAAAGCAGCAGATGACACTGAATTCGGAGAGCTATATCTCTTCAAGTGGACTACACTTCTCATCCCACCAACAACTCTTATAATCTTGAATATTGTGGGAGTTGTTGCTGGAGTCTCTGATGCCATCAACAATGGATCTGGCTCATGGGGGCCTTTGTTTGGGAAGCTATTCTTCTCCTTTTGGGTCATTGTTCACTTATATCCTTTCCTCAAAGGTCTCATGGGAAAGCAGAACAGGACTCCTACTATTGTAGTCCTCTGGTCAATCCTTCTAGCATCAATTTTCTCATTGATTTGGGTCCGGATTGATCCCTTCTTGCCCAAGCAAACTGGTCCAGTCCTCAAACAATGTGGGGTTGAATGCTAA 3144 0.4462 MASNSMAGLITGSHSHSHLSHDSDEHQPPNHQSSSKTCRVCGDEIGYKEDGGLFVACHVCGFPVCRPCYEYERSEGNQCCPQCNTRYKRHKGCPRVVGDEEENFDAEDFDDEFQTKNHDDDADRQHAANHLENGDYNQQKLHTNGQAFSSAGSVTGKDFEAEKEFYSNEEWQERVEKWKVRQEKKGLLNKEDGKEDQGEDDDYLLAEARQPLWRKVPIPSSLINPYRIVIVMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPITRETYLDRLSIRFEREGEPNQLCPVDIFVSTVDPLKEPPIITANTVLSILSVDYPVEKVCCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVKINALVAKAQKKPEDGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVFEKRPKMTCDCWPSWCCFCCGKRKSKSKKKSGRGLFSALYTKKKKMMGKDYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAVHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEICLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTVPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVTIVDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGSGSWGPLFGKLFFSFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1382 1047 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 161 1047 - -
Dod03g1382 1047 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 161 1047 - -
Dod03g1382 1047 MobiDBLite consensus disorder prediction 1 16 - -
Dod03g1382 1047 Pfam Cellulose synthase 306 1040 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod03g1382 1047 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 23 123 - -
Dod03g1382 1047 SUPERFAMILY RING/U-box 22 104 - -
Dod03g1382 1047 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 112 IPR013083 -
Dod03g1382 1047 Pfam Zinc-binding RING-finger 29 103 IPR027934 -
Dod03g1382 1047 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 418 598 IPR029044 -
Dod03g1382 1047 Coils Coil 404 424 - -
Dod03g1382 1047 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 23 123 - -
Dod03g1382 1047 SUPERFAMILY Nucleotide-diphospho-sugar transferases 319 844 IPR029044 -
Dod03g1382 1047 MobiDBLite consensus disorder prediction 1 34 - -
Dod03g1382 1047 CDD mRING-HC-C4C4_CesA_plant 36 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1382 Dod-Chr3 17820647 17826363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1382 29 1047 Glycosyltransferase AT5G05170 65.299 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1382 K10999 - gmx:100781996 1943.7