Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1379 ATGAGTTCTTCCACCACTGCCTTTAACAAATGCTTCAACCCTCATCTTCTTCATCATCACCACCACGACCACCACCACGACCACCATCACCATCATCATCATCATCACCTCACTTTCACTTTCCTTCATTCTTGCTTCTTCTTCTTGTTTCTCATCTCAGCTCCTGCATGCGCTTCAACGTTTTCCGGTAATGAAACTGGAGATTTAGAAAAAAGAGGTGATTTGTTTCCGCAGATTCTAAGAGATGAGGCAGTGGGGAGACTCTATGAGCTTGGAAAGGTGAGTGATGGTAGTGGCTATTTGGAGAGGACATTTTTGAGTCCTGCATCCAGGAGAGCAATTAATCATATTCGCAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGATCAAATGGGAAATGTACATGGTCGAGTTGAGGGTGCAAATGCAGATGCTAAGGCTTTATTGATTGGATCTCACATGGACACTGTTGTTGATGCTGGGAAGTTTGATGGATCACTAGGAATAGTCTCTGCAATATCTGCATTAAAGGCTATGCATGTCAATGGAAAGCTGCAAAAGCTAAAGCGCCCTGTTGAGGTGATTGCATTTTGTGATGAAGAGGGTGTAAGGTTTCAAACTACTTTCTTGGGCAGTGGTGCTATAGCTGGTATTTTGCCTGTTACAACACTGGAGATATCTGACAAGAGGGATGTAATGATAAAAGATGTTCTTAAGGAGAACTCAATAGATATTACAGAGGAAAGTTTGTTACAGCTCAAGTATGACCCAAAATCTATTTGGGGCTATGTCGAGGTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCGCTTGGTGTGGTTAAAGGCATAGCTGGGCAGACCCGATTGAAAGTTACAGTTAGAGGATCACAAGGTCATGCTGGAACTGTTCCAATGTCCATGCGCCAAGATCCTATGGCTGCAGCCGCTGAATTAATTGTAGTTATGGAAAGCCTCTGTAAACATCCTCAAGAATACCTTTCTTATGATGGTCATTGCAGCGATTCTTCGGTGAAATCACTTTCGAGCTCACTTGTTTGTACTGTTGGAGAGATATCAACATGGCCAAGTGCCAGTAATGTCATTCCAGGCCAGGTTACATATACTGTGGATATTCGAGCGATTGATGACCTTGGACGAGAGGCTGTTATCTATGATTTATCGAAAAGAATTTATCAAATATGCGATAAGCGTTCCGTTTCCTGCATTATTGAACACAAGCATGATGCAGGTGCAGTGATTTGTGATTCTGAACTAAGTTCACAGCTCAAGTCTGCAGCTTATTCAGCACTCAAGAGGATGGAGGGTGACATCCAGGATGAAGTGCCAACATTAATGAGTGGAGCAGGACATGATGCAATGGCTATGTCTCACTTAACAAAGGTGGGAATGCTGTTTGTGCGGTGTCGCGGAGGAATAAGTCACTCACCACAGGAGCATGTTCTAGACAATGATGTCTGGGCGGCTGGTTTAGCAACCTTGTCATTTCTGGAGAACCTATCATAG 1542 0.4377 MSSSTTAFNKCFNPHLLHHHHHDHHHDHHHHHHHHHLTFTFLHSCFFFLFLISAPACASTFSGNETGDLEKRGDLFPQILRDEAVGRLYELGKVSDGSGYLERTFLSPASRRAINHIRKWMEDAGLRTWVDQMGNVHGRVEGANADAKALLIGSHMDTVVDAGKFDGSLGIVSAISALKAMHVNGKLQKLKRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPVTTLEISDKRDVMIKDVLKENSIDITEESLLQLKYDPKSIWGYVEVHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVVMESLCKHPQEYLSYDGHCSDSSVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKRIYQICDKRSVSCIIEHKHDAGAVICDSELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENLS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1379 513 PANTHER ALLANTOATE DEIMINASE-RELATED 73 506 - -
Dod03g1379 513 Gene3D - 291 423 - -
Dod03g1379 513 CDD M20_bAS 87 510 - -
Dod03g1379 513 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 87 336 IPR010158 GO:0016813
Dod03g1379 513 Pfam Peptidase dimerisation domain 291 403 IPR011650 -
Dod03g1379 513 Pfam Peptidase family M20/M25/M40 151 501 IPR002933 GO:0016787
Dod03g1379 513 PANTHER ALLANTOATE DEIMINASE-RELATED 73 506 IPR010158 GO:0016813
Dod03g1379 513 SUPERFAMILY Bacterial exopeptidase dimerisation domain 291 423 IPR036264 -
Dod03g1379 513 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 150 159 IPR001261 -
Dod03g1379 513 Gene3D Zn peptidases 97 502 - -
Dod03g1379 513 SUPERFAMILY Zn-dependent exopeptidases 76 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1379 Dod-Chr3 17748675 17754324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1379 K02083 - gmx:100819399 865.529