Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1367 ATGGATTCTCCTGAGGAGAGCACTGATGCAGATGGCTACATAGAGAAGGTTCAAATCCCATCAGCTCTAATAGAAAAAAACTTTGGTGATGCTTTGAAGGAAGCTTTAAAAAACAAAGATGAAGTTTTGCTAAGAATAGACTGGAGAGAGTCAGTGCCCCACCCTGACAACAGGGTTGAGTATGAGTTCTGGACTAACAGCAATGATGAATGTGGGGCTCGTTGCGACGAGCAGATGAATTTTGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGTGGCTATACCTTATTCACTCCACACTATATAACTTGGTTTTGTCCAAAGCCTTTTGTTCAGACCAGTCAATGCAAGTCTCAGTGTATAAACAATGGGAGATATTGTGCACCTGATCCAGAGAAGGATTTTGGAGAGGGCTATGAAGGGAAGGATGTAGTGTATGAAAACTTGAGGCAGCTCTGTGTCCATAGAGTTGCCAATGAGAGCAACCGTTCATGGGTTTGGTGGGATTATGTGACAGATTTCCATATCAGATGCTCTCTGAAGGAAAAGAAATACAGCAAAGAGTGTGCTGAAGATGTCATGAAAACCTTAGATCTGCCCATTGAGAAAATTAAGAAGTGCATGGGTGACCCTGAAGCGGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACTACTCCAGATTGGGCATGGATCTCGTGGTGATGTGACCATCTTGCCAACATTGGTTATAAACAATGTCCAGTATCGAGGAAATTTGGAGAGAACTGCTGTCCTGAAGGCTGTATGTTCTGGATTTAAGGAGACTACCGAACCTCAAGTTTGTTTGAGTGGAGATATTGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGTTGGCAGGACACAAAGGCTAACATAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGTGAGTGCCCTGTTGTGAAAGGTGTTCAATATAAGGGTGATGGTTATACAGAATGTGAAGCTTTTGGACCTGCAAGGTGTTCAATAAACAATGGAGGTTGTTGGTCGGAAACTAAAGATAAAACAACATTCTCAGCTTGCTCAGAATCTATGGTAAATGGCTGTAAGTGCCCTGCTGGGTTTACTGGAGATGGATACAAATGTGAAGATGTTGATGAATGCAAGGAACGAAGTGCTTGTCAATGTGATGGTTGCACCTGCAAGAACAGTTGGGGTAGCTACGATTGTAAATGCAAGGGCAATCTTCTATATATAAGGGAGCAAGATGTTTGTATTGCAGAAAGAAGTGGATCAAGATTTGGACGTTTCCTTGCCTTTTTGGTCATAGCAGTTGTTGTGGGCGCTTGTCTAGCTGGTTACATATTCTACAAATACAGGCTCAGGTCTTACATGGACTCCGAGATAATGGCTATCATGTCACAATACATGCCTCTGGACCAGCAAAATAATGTTGTTCAAGCTGAAGCTCAGCCTTTACGACCACAAAGCACTGTATAA 1500 0.4247 MDSPEESTDADGYIEKVQIPSALIEKNFGDALKEALKNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVQTSQCKSQCINNGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHIRCSLKEKKYSKECAEDVMKTLDLPIEKIKKCMGDPEADVENEVLKNEQLLQIGHGSRGDVTILPTLVINNVQYRGNLERTAVLKAVCSGFKETTEPQVCLSGDIETNECLERNGGCWQDTKANITACKDTFRGRVCECPVVKGVQYKGDGYTECEAFGPARCSINNGGCWSETKDKTTFSACSESMVNGCKCPAGFTGDGYKCEDVDECKERSACQCDGCTCKNSWGSYDCKCKGNLLYIREQDVCIAERSGSRFGRFLAFLVIAVVVGACLAGYIFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVQAEAQPLRPQSTV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1367 499 Gene3D Laminin 333 426 - -
Dod03g1367 499 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 475 - -
Dod03g1367 499 ProSitePatterns Calcium-binding EGF-like domain signature. 384 410 IPR018097 GO:0005509
Dod03g1367 499 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 1 475 - -
Dod03g1367 499 CDD EGF_CA 384 413 - -
Dod03g1367 499 SMART egfca_6 384 426 IPR001881 GO:0005509
Dod03g1367 499 Gene3D - 1 55 - -
Dod03g1367 499 Gene3D Laminin 278 332 - -
Dod03g1367 499 SUPERFAMILY Growth factor receptor domain 338 459 IPR009030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1367 Dod-Chr3 17553979 17558629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1367 1 499 Miscellaneous Gene Families AT1G30900 73.956 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1367 - - aip:107639095 969.533