Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1364 ATGCCACAACCGCCACGAGAGCTTCCTGGGTTCTACTATGACCCAGAGAAGAACAGGTATTTCCCCATCAAAGGTCCAATACCTGGCTCCTCTCGTTCTTCTTCAAAGCCTACTTCTCAAAAGGCACCCCAAACCTCTTCAACTCAGGGAAGCAGTAGGAGTAGTTCTAGGAAGCTTAGGAACAGAACATGTAAGTTGCTTCAGGCTAGGGAGTTAGATGGTCATCATGTCATTGCCTCCAACCATAATTCCAAGTGCAACTTCGCAGAGGAGTTCAGGAAAATACAAGCATCACAGCCTGTGGTATGGAAATATCAGGGAACAGATAGGATTGGTATTAGTGCTTTGAATCAGGTACGTGTCGATGTGCAGACGTTAGAGGGTCGAGCTGAGTCTGATGTTCTATTGACAGGCAGCATAAATGGTGCATTGAGTTTTTGTGAAGTTGGAAGGGATGGAGAATATATTGATGGCGGGGTAAAATGGAGGCCAGAATGTGTGAAAAATTATGTTAAAGGGAAAACTGATCAGAATAATCCGATGCCTGGGCCAGTTACCAAACCTAATGGAGGTTCCTTGCTTATGTCGTCCAGTATATCTTGCATAAGACTGGGTCCAAACTGCTCTTCTCATGCTGTGAATAATGGTCCTATTGTTGGACATGCATTGTTTACGACTTTGGGAGCAGAGGCATCAGGTGGATCAGTTTATACTCTCGGGCTTGTTGAACCATTAGATCTTGGCCAAGGTGTACTAAACACGTGGAGCAGACTAGAAGAAATTGCTTCGTTCAAGTGTACTCTTTGGACAGCAGAATATGATTATAGTAGACATCGGGCTATAATTGGTACTAACATGGGAGCTGCTTCAGTGGATTTGGAAACTGGGATTACATCATGGCTTTTACGATGTAAAAGTGATGTCTTTGCACAACAGATTGTTAATTCTGGAAATCTGATTTTATGTGGACTCAGAAATGGGGCAATTGTCAGTGTAGATTTTCGCGAGAAAAGAGAAAGGCTTTCAAGAACACTCATTACACATAGAATACCTTATGCATCGTCAGATAAGAATGTTGGAAGTTCTAACAAATACTGGTTCAAGCTCAGTGGAGACATATACCCTTCTCATACCATCAAGATGCCATCATCTATATCCTGTTTGGTCCCGCTTCAGTTTGATGATCAATACTTCTTGGCAAGCTCCATGGATGGAACGGTGAAGCTCTACGATCGTCGCCTGCTCAAGAGGGATGCTGTTCAATCATATGAAGGGCATGTGAATTCCCATACCCGAATACAGCTCGGGGTTGACCCAACTGAGAGATTTGTTATGTCAGGTGGAGAGGATTGTAACCTACGCATATGGAGTATCAAAACCGGTGAACTGCTTTTTGAGGACAAGTTCTCTGATTCAGTTCTTTCCACTGTGTGCTATCAAACTTGTAAAGGGTTTAAACCAGAGAATGAAAATCAATACCAGCATGACTCTTCTATAGGTGCATGGCTTGGGTCACATGAAGGACTTTTTTATATGCGCTGGTTATGA 1548 0.4315 MPQPPRELPGFYYDPEKNRYFPIKGPIPGSSRSSSKPTSQKAPQTSSTQGSSRSSSRKLRNRTCKLLQARELDGHHVIASNHNSKCNFAEEFRKIQASQPVVWKYQGTDRIGISALNQVRVDVQTLEGRAESDVLLTGSINGALSFCEVGRDGEYIDGGVKWRPECVKNYVKGKTDQNNPMPGPVTKPNGGSLLMSSSISCIRLGPNCSSHAVNNGPIVGHALFTTLGAEASGGSVYTLGLVEPLDLGQGVLNTWSRLEEIASFKCTLWTAEYDYSRHRAIIGTNMGAASVDLETGITSWLLRCKSDVFAQQIVNSGNLILCGLRNGAIVSVDFREKRERLSRTLITHRIPYASSDKNVGSSNKYWFKLSGDIYPSHTIKMPSSISCLVPLQFDDQYFLASSMDGTVKLYDRRLLKRDAVQSYEGHVNSHTRIQLGVDPTERFVMSGGEDCNLRIWSIKTGELLFEDKFSDSVLSTVCYQTCKGFKPENENQYQHDSSIGAWLGSHEGLFYMRWL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1364 515 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 13 513 - -
Dod03g1364 515 PANTHER KATANIN P80 SUBUNIT 13 513 - -
Dod03g1364 515 SMART WD40_4 416 457 IPR001680 GO:0005515
Dod03g1364 515 SMART WD40_4 372 411 IPR001680 GO:0005515
Dod03g1364 515 MobiDBLite consensus disorder prediction 28 57 - -
Dod03g1364 515 Pfam WD domain, G-beta repeat 383 411 IPR001680 GO:0005515
Dod03g1364 515 Pfam WD domain, G-beta repeat 420 457 IPR001680 GO:0005515
Dod03g1364 515 MobiDBLite consensus disorder prediction 1 60 - -
Dod03g1364 515 ProSiteProfiles Trp-Asp (WD) repeats profile. 423 466 IPR001680 GO:0005515
Dod03g1364 515 SUPERFAMILY WD40 repeat-like 264 478 IPR036322 GO:0005515
Dod03g1364 515 Gene3D - 273 501 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1364 396 480 Miscellaneous Gene Families AT5G08390 27.059 1.66e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1364 K11799 - gmx:100798753 733.791