Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1354 ATGGCCACTGCCAAGAACGACATGATGATCATCACTGACATTGAATCCACTGATCAAGAAACTAGTATAGAAGATAATGCACATTCACAACAAGATCTACCTTCTTCACCCATCATAGACAACAACAATAACAACATCACAATGCATGATGATGATGAGGAGGAGGATGAAAAGTGTAGCACCAACAAGAGGTACATGCCCCTTTTGGTGATCAATTACCTTTCCCTCTTTGTTGGCTCACTCTCTTCAAGCTTGCTCTCAAAATACTACTTCATCCACAAAGGCTCAAGCAGGTGGGTCTCAACTTGGGTCCAATCCGCAGGCTTCCCTCTCTTGCTCATCCCAATCCTCTTCCCTTGCCGCCTCAACCTCACAAAGAGGAAGCCCTTCACTGGTTTCAACAAAAAGATGCTAACTTTATCAATCTCAATTGGCCTCATGCTGGGACTCAACAACCTCCTCTTCTCATGGGGTAACTCATTCCTACCCGTTTCGACCTTTGCACTCTTGCTATCTTCCCAACTCGCCTTCAACCTTGTCCTCTCAGTCCTCATCGTCAAGCAAAAAATCACATTCTCAAACCTCAATTGCGTCATCCTCCTAACCTTAAGCTCAGTCCTCCTAGCACTAGACTCTAGTCACGACAACAACAATGTCGCCATCAACAGAGAAAAGTACTTCGTTGGGTTCGCTTGCACAATCGGTGCAGGGTTGTTGTTTGCACTGTATTTGCCGGTAATGGAGAAGGTCTACAAGAGGGTCTATTGCTACGAGATGGTGATGGAGATGCAACTCATAATGGAGATTGCTGCAACATTGTTGGCCACCATAGGGATGACGTGTGATGGTGGGTTTTCCGAGATGAAGGTTGAAAGTCAAAGGGTGTTTGATAAGGGTCCCAGGGTTTACTGGGTGACGGTTATGGGGAACGTGGTGACGTGGCAGCTGTGCTTCGCGGGAACTGCGGGGATGGTGTTCCTGACGTGTTCGGTGACAGGGGGGATTTGCATGACAGCGTTGGTGTCGATGAATGTGGTCGGAGGGGTGGTGGTTTTCAGAGATTCCTTTGATGGTGTTAAGGCTGTGTCCACTGCCTTGTGCGTGTGGGGTTTCTCCTCCTATGTGTACGGATTGTATTCTAAGATGATGGTGGAGCAGAAGAAGAATAGGAAGAGGATGATGAGGAACAAGAATGAGGAGGAGTGCACAGAGATGATCCGTATTGTGAATCCTCGTGGTGTGACCTATTGA 1251 0.4732 MATAKNDMMIITDIESTDQETSIEDNAHSQQDLPSSPIIDNNNNNITMHDDDEEEDEKCSTNKRYMPLLVINYLSLFVGSLSSSLLSKYYFIHKGSSRWVSTWVQSAGFPLLLIPILFPCRLNLTKRKPFTGFNKKMLTLSISIGLMLGLNNLLFSWGNSFLPVSTFALLLSSQLAFNLVLSVLIVKQKITFSNLNCVILLTLSSVLLALDSSHDNNNVAINREKYFVGFACTIGAGLLFALYLPVMEKVYKRVYCYEMVMEMQLIMEIAATLLATIGMTCDGGFSEMKVESQRVFDKGPRVYWVTVMGNVVTWQLCFAGTAGMVFLTCSVTGGICMTALVSMNVVGGVVVFRDSFDGVKAVSTALCVWGFSSYVYGLYSKMMVEQKKNRKRMMRNKNEEECTEMIRIVNPRGVTY* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1354 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 214 - -
Dod03g1354 416 Pfam Purine nucleobase transmembrane transport 68 381 - -
Dod03g1354 416 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 37 393 - -
Dod03g1354 416 MobiDBLite consensus disorder prediction 17 44 - -
Dod03g1354 416 PANTHER OS09G0467300 PROTEIN-RELATED 37 393 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1354 Dod-Chr3 17271403 17272844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1354 50 377 Organic Solute Cotransporters AT1G30840 64.545 5.35e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1354 - - cam:101488564 496.893