Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1346 ATGGCTCCAGTACCCATTTCATCCATAAACGTTGGCCACATTGATGATGTCATAGAACTAAGGAAAACTAAGCCAGAAACAATTCCTCAAAGATTTGTGCGAGACATGACAGAAAGACCAACAGCTGCTAAAGCTCATTCCCCACCAAATAGCGATGAAATGCCTGTCATTGATTTCTCTAAGCTTAGTAAAGGGAACAAAGAGGAGCTCTTAACTGAGCTGTTGAAGCTTGCAACTGCTTGTGAAGAGTGGGGATTTTTTCAGGTGATTAACCATGATGTTAACCTCAATCTGATGGAAAGCATAGAGAAGATGAGCACCGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATATCCAATGCTTCCTGGCACAGTCCAAGGGTATGGACAGGCTTTTATTTTTTCGGAGGACCAAAAGTTGGACTGGTGCAACATGTTGGCTCTTGCAATTGAACCTCAACACGCACGAAATCCAAATCTATGGCCAAAGAGTCCAGAAAGATTTAGTGAAACTGTGGAAGAGTACTCAAGAGAAGTACGGAAACTATGTCATAACATGCTCAGACACATAGCTTTAGGCCTGAGTTTGAAAGAAGATGTGTTTGAGAAAATGTTTGGTGAGGCAGTTCAAGCCATAAGGATAAATTACTACCCTGCATGTTCAAGACCTGACCTTGTTTTGGGTCTGAGCCCCCATTCAGATGGAAGTGCCCTCACTGTGCTGCAGCAAGCAAAGGGAAGCCCAGTGGGGCTTCAGATACTCAAGGACGGTATGTGGTTGCCTGTTCAGACAATTCCAAATGCCCTTGTCATCAACATTGGAGACACCATAGAAGTTCTTACAAACGGAAAATACAAGAGTGTGGAGCATAGAGCTGTGGCTCATAAGGAGAAAGATCGACTCTCACTTGTGACATTTTATGCTCCTAGCTATGAAGTAGAGCTTGGTCCAATGCCTGAATTTGTTGACGAAAACCACCCATACAAGTACCGAAGATACAATCATGGAGAATATAGTAAACACTACGTAACAAATAAGCTGCAAGGAAAAAAGACCTTAGACTTCGCCAGGATCTAA 1083 0.4275 MAPVPISSINVGHIDDVIELRKTKPETIPQRFVRDMTERPTAAKAHSPPNSDEMPVIDFSKLSKGNKEELLTELLKLATACEEWGFFQVINHDVNLNLMESIEKMSTEFFMLPLEEKQKYPMLPGTVQGYGQAFIFSEDQKLDWCNMLALAIEPQHARNPNLWPKSPERFSETVEEYSREVRKLCHNMLRHIALGLSLKEDVFEKMFGEAVQAIRINYYPACSRPDLVLGLSPHSDGSALTVLQQAKGSPVGLQILKDGMWLPVQTIPNALVINIGDTIEVLTNGKYKSVEHRAVAHKEKDRLSLVTFYAPSYEVELGPMPEFVDENHPYKYRRYNHGEYSKHYVTNKLQGKKTLDFARI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1346 360 PANTHER PROTEIN SRG1 10 360 - -
Dod03g1346 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 209 311 IPR005123 -
Dod03g1346 360 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 360 - -
Dod03g1346 360 SUPERFAMILY Clavaminate synthase-like 16 352 - -
Dod03g1346 360 Pfam 2OG-Fe(II) oxygenase superfamily 212 311 IPR044861 -
Dod03g1346 360 Gene3D - 12 352 IPR027443 -
Dod03g1346 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 165 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1346 Dod-Chr3 17139083 17141298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1346 53 360 Glycosyltransferase AT5G59530 35.938 2.76e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1346 - - gmx:100785152 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1346 03 17139083 17141298 Dod03g1346 03 17139083 17141298 ECH