Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1340 ATGGCTGTGGCAATGGAGAAGGAAGAGGAGGAGGAGGAGCCGAGCCAGCTGAAGAGGGCGCTGATTGATTCCTCGGCTGGAGCTATTTCGGGTGCTATATCACGAACAATTACCTCTCCCCTTGATGTTATTAAGATCAGGTTCCAGGTTCAGCTAGAGCCCACATCTTCGTGGGCTTTACTACGCAAGGAATTGTATGCACCACCATCAAAATATACTGGCATGCTTCAAGCAAGCAAAGATATTTTTAGAGAAGAAGGCATACGGGGTTTTTGGCGGGGCAATGTGCCAGCTTTGCTCATGGTTATGCCATATACTGCCATACAATTCACAGTTCTACACAAGCTGAAGAGTTTTGCCTCTGGCTCTTCAAAGACAGAGAATCACATTAATTTGAGCCCTTATCTTTCCTATTTGAGTGGGGCATTAGCTGGGTGTGCAGCTACTGTAGGATCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCTCAAGGTGAACCTAAGGTGTATCCAAACATGAGGTCAGCATTCATTGATATTGTCCGGACCCGAGGCTTCCCAGGTTTGTATGCTGGATTGTCACCAACACTAGTTGAGATTATACCTTATGCCGGCCTACAGTTTGGCACCTATGATACATTTAAACGTTGGACCATGGCATGGAACCGTCTTCAATACTCAAATGCTACTGCAGAAGATAGCCTCTCTAGCTTTCAGCTTTTCCTTTGTGGTTTGGCTGCTGGAACATGTGCTAAGCTTGTTTGTCATCCACTTGATGTGGTCAAGAAAAGATTTCAGATTGAAGGTCTACAAAGGCATCCAAGATATGGTGCTCGGGTTGAACATCGTGCGTACAGAAATATGTTTGATGCCATGAAACGTATATTACAGGTAGAAGGTTGGGCTGGTCTGTATAAGGGGATTGTCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTAGCATATGAATTGACATCAGATTGGCTGGAATCTATGTGGACTTGA 1020 0.449 MAVAMEKEEEEEEPSQLKRALIDSSAGAISGAISRTITSPLDVIKIRFQVQLEPTSSWALLRKELYAPPSKYTGMLQASKDIFREEGIRGFWRGNVPALLMVMPYTAIQFTVLHKLKSFASGSSKTENHINLSPYLSYLSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFIDIVRTRGFPGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMAWNRLQYSNATAEDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDAMKRILQVEGWAGLYKGIVPSTVKAAPAGAVTFVAYELTSDWLESMWT* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1340 339 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 13 337 - -
Dod03g1340 339 SUPERFAMILY Mitochondrial carrier 19 328 IPR023395 -
Dod03g1340 339 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Dod03g1340 339 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Dod03g1340 339 PRINTS Mitochondrial carrier protein signature 36 50 IPR002067 GO:0055085
Dod03g1340 339 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Dod03g1340 339 PRINTS Mitochondrial carrier protein signature 23 36 IPR002067 GO:0055085
Dod03g1340 339 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Dod03g1340 339 Gene3D Mitochondrial carrier domain 15 336 IPR023395 -
Dod03g1340 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 333 IPR018108 -
Dod03g1340 339 PANTHER SOLUTE CARRIER FAMILY 25 13 337 - -
Dod03g1340 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 218 IPR018108 -
Dod03g1340 339 Pfam Mitochondrial carrier protein 24 120 IPR018108 -
Dod03g1340 339 Pfam Mitochondrial carrier protein 236 334 IPR018108 -
Dod03g1340 339 Pfam Mitochondrial carrier protein 133 219 IPR018108 -
Dod03g1340 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 18 119 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1340 Dod-Chr3 17025605 17030925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1340 10 339 Organic Solute Cotransporters AT3G21390 75.150 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1340 K15108 - gmx:100803750 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1340 03 17025605 17030925 Dod03g1340 03 17025605 17030925 ECH
Dod05g2699 05 53154797 53158130 Dod03g1340 03 17025605 17030925 PCT