Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1339 ATGGAAAACTGGACCCTAGAACTCAACATCATATTAGCGAAGGATCTCAACAATGTCAACATGTTCTTCAAGATGAAGGTATATGCCACAATTTCGCTTTCCGGCGACCCTGTCCATAACAAAAAGGCCAAGACACGCGTGCATGTTGACGGCGGTTGCAACCCAACATGGAACTGTTCGGTGAAGTTCATGCTCAAGGAGTCGTTGGTGCAGGAGAACTGCCTCTCTCTCGAGATCACGATCATCTCTAATCGCACCTTCCTCAGTGACACCGTCGTGGGCACCGTCAAAGTACCCCTCATTGAACTCCTTAACGACCCTGGGGCCAATGATGGGAACTTTCGGCCAGTCACGTACCAGGTCATGAGGCCCTCAGGAAAGCCAAAGGGCTCCCTGCATTTCTCTTACAATTTGGGACCGCAGGACTCGCTGGCGGTGGGTTCAAAGCAAGAGTCGGCAATTAGTAATCCACAGCCAACGACAGATTCAAAGCATGAGCAAGTAGTGGCTTATGCCCATGATGCCGTGGCAGTGATAGGAGCAAGCTTCCCACCATATGAAAACTCTTACCTGCCACTGCCGCCGCAATATCCAGTTGGGTATGGATATCCATCGCCTCATAGCGGATATGGGTATCCGTCCCAATCTGGTTATTGGTATCCTCCTCACAGATACCTGTCAACCCCACCAAGCTATGGGTATTCAGCCCATGCTGGTGGTGTATCACAGGAATCGTATATACCAGGAGCCGATCCGCAACAGCCGGGTCATGGGTATCCTCCCGTGGGATACCCAAACCAATTTGGCTATGTGTATGATGGATCCCAACTTGGTAAAAAACCATCTAAGTTGGGAGTCGATCCTTCTCAGCCGGGTCATGGGTATCCTCGTCCTTTGGGGTACACAACCCAATGGGGCTATGGGTATCCGGGTCATGCTGGTTATAGATCCCAAGCCCGCTTAGAAACCTCGACGAGTTACAAGAAGATAGGGATGGGGGTTGGGAGCTGCTGCATTGGTAATGGGGTTGCTTGGCAGCGCCGTTAG 1047 0.5129 MENWTLELNIILAKDLNNVNMFFKMKVYATISLSGDPVHNKKAKTRVHVDGGCNPTWNCSVKFMLKESLVQENCLSLEITIISNRTFLSDTVVGTVKVPLIELLNDPGANDGNFRPVTYQVMRPSGKPKGSLHFSYNLGPQDSLAVGSKQESAISNPQPTTDSKHEQVVAYAHDAVAVIGASFPPYENSYLPLPPQYPVGYGYPSPHSGYGYPSQSGYWYPPHRYLSTPPSYGYSAHAGGVSQESYIPGADPQQPGHGYPPVGYPNQFGYVYDGSQLGKKPSKLGVDPSQPGHGYPRPLGYTTQWGYGYPGHAGYRSQARLETSTSYKKIGMGVGSCCIGNGVAWQRR* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1339 348 SMART C2_3c 5 112 IPR000008 -
Dod03g1339 348 Gene3D C2 domain 2 142 IPR035892 -
Dod03g1339 348 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 140 IPR035892 -
Dod03g1339 348 PANTHER PROTEIN SRC2 4 262 - -
Dod03g1339 348 Pfam C2 domain 4 105 IPR000008 -
Dod03g1339 348 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Dod03g1339 348 PANTHER INGRESSION PROTEIN FIC1 4 262 - -
Dod03g1339 348 CDD C2_SRC2_like 5 134 IPR044750 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1339 Dod-Chr3 17018465 17019511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1339 - - mtr:MTR_2g436900 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1339 03 17018465 17019511 Dod03g1339 03 17018465 17019511 ECH
Dod05g2698 05 53137534 53139406 Dod03g1339 03 17018465 17019511 PCT