Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1325 ATGTTGGTTTACCAGGACCTCAACACAGGTGATGAGCTTCTCTCAGACTCCTTCCAATACAAGGAAATTGAGAATGGAATCCTGTGGGAAGTCGATGGAAAGTGGGTTGTTAAAGGAGCAGTTGATGTAGACATTGGTGCAAACCCTTCTGCTGAAGGTGGAGGAGAAGATGAGGGTGTTGACGACCAGGCTGTTAAGGTTGTTGACATTGTTGACACATTCAGACTTCAGGAGCAACCTGCTTTCGACAAGAAGCAGTTTCTTGCCTACATTAAGAGGTATATCAAGTTGTTGACACCCAAACTTGATGAAGAGAAACAAGAGCACTTTAAAAAGAACATTGAGGGAGCCACTAAATTCCTGCTTTCCAAGCTCAAGGATCTTCAGTTTTTTGTTGGTGAGAGCATGCATGATGACGGTACCTTGGTCTTTGCCTACTACAAAGATGGCGCAGTTGACCCAACATTCCTGTTCTTTGCACATTCCTTGAAGGAGGTGAAATGCTAA 507 0.4398 MLVYQDLNTGDELLSDSFQYKEIENGILWEVDGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFLAYIKRYIKLLTPKLDEEKQEHFKKNIEGATKFLLSKLKDLQFFVGESMHDDGTLVFAYYKDGAVDPTFLFFAHSLKEVKC* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1325 168 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 1. 45 55 IPR018103 -
Dod03g1325 168 Gene3D Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 1 168 IPR011323 -
Dod03g1325 168 SUPERFAMILY Mss4-like 1 168 IPR011057 -
Dod03g1325 168 PANTHER TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOG 1 168 - -
Dod03g1325 168 ProSiteProfiles Translationally controlled tumor protein (TCTP) domain profile. 1 168 IPR034737 -
Dod03g1325 168 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 2. 125 147 IPR018103 -
Dod03g1325 168 PRINTS Translationally controlled tumour protein signature 1 21 IPR018105 -
Dod03g1325 168 PRINTS Translationally controlled tumour protein signature 46 57 IPR018105 -
Dod03g1325 168 PRINTS Translationally controlled tumour protein signature 60 79 IPR018105 -
Dod03g1325 168 Pfam Translationally controlled tumour protein 1 164 IPR018105 -
Dod03g1325 168 PANTHER TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED 1 168 IPR018105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1325 Dod-Chr3 16831790 16834087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1325 - - rcu:8278734 308.916