Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1318 ATGGCCATGTTTGAAGAGAATAATCATTTAGACAATGTGGATCCAGAGGCTGTTGCTTTCCAATGCAAGATCTTAGCAAAATCTGGATTCAGTGAGGAAACATCCATTCCTCCATCTCTTGCTCAGATACCAAAAGTAAAATCTCTTGCCTCTGCCCTTGGGGAGGTTGAAACAATAATGTATTCAGCAATCAGAGACCTGTTTAAGAAAAACAACATCAACCCAAAAGCCATTGACATACTCATCACTAACAGTTGTGTGTTCTGTCCAACACCATCCCTTAGTGCCATGGTGGTTAACAAGTTCAGAATGAGGAGCAGCATCATGAGCTTCCACCTATCAGGCATGGGATGCAGTGCTGGAATCATATCAGTGAGTCTGGCTAAAGACCTGTTGAGAGTTCACAGGAACTCACTGGCTCTAATAGTAAGCACAGAGACCCTTAATCTAAATTGGTACACAGGTAAAGTCCCATCCATGCTGCTAACTAATTGCCTATTCAGAATGGGTGGAGCTGCTATATTGATGTCTAGCAGGGTCAATGATAGGCATAAGGCAAAGTATAAACTGCAGCATATTGTTAGAACAATCAATGCACAAGATGATCAATCTCATGGCTGCGTCTACCAGGATGTGGATCCAGAGAACAAAGAAGGTATATCAATATCAAAGAATGTTGTCAATGTGGCTGGAGATGCACTGAAGAAGAATATGGCTTCACTGGGGCCTTTGGTTTTGCCATTGAGGGAGCAGTTCCTGTATGTATTTTCCATAATTTGCCGCAAGGTGTTGTCTGCAAGAAGAACAAGCATCTATACTCCAAATTTCAATCATGCTTTTGAGCACTTCTGCATACATTCAGGGGGAAGATCTGTTATAAAAGCCATTGAAAGAAACTTGAGGTTAAGGAAACAGGATGTGGAGGCATCAACCATGACTCTCTACAGGTTTGGAAACACCTCATCCTCTTCAATTTGGTATGAGCTTAGCTACATAGAAGCAAAAGGGAGGATGAGATGTGGTGATAGGGTATGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAGCAGTGCAGTGTGGAAGTGTTTATGCGATGTGAAGGCAGACACTGGCAGTGCATGGAGAGATACAATTCACTCATACCCTGTAGAAGTACCTGATGTGGGAATAAGCTGA 1176 0.4252 MAMFEENNHLDNVDPEAVAFQCKILAKSGFSEETSIPPSLAQIPKVKSLASALGEVETIMYSAIRDLFKKNNINPKAIDILITNSCVFCPTPSLSAMVVNKFRMRSSIMSFHLSGMGCSAGIISVSLAKDLLRVHRNSLALIVSTETLNLNWYTGKVPSMLLTNCLFRMGGAAILMSSRVNDRHKAKYKLQHIVRTINAQDDQSHGCVYQDVDPENKEGISISKNVVNVAGDALKKNMASLGPLVLPLREQFLYVFSIICRKVLSARRTSIYTPNFNHAFEHFCIHSGGRSVIKAIERNLRLRKQDVEASTMTLYRFGNTSSSSIWYELSYIEAKGRMRCGDRVWQIAFGSGFKCSSAVWKCLCDVKADTGSAWRDTIHSYPVEVPDVGIS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1318 391 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 280 361 IPR013747 -
Dod03g1318 391 CDD CHS_like 19 360 - -
Dod03g1318 391 Gene3D - 7 361 IPR016039 GO:0016746
Dod03g1318 391 Pfam FAE1/Type III polyketide synthase-like protein 7 263 IPR013601 GO:0006633|GO:0016020|GO:0016747
Dod03g1318 391 SUPERFAMILY Thiolase-like 190 362 IPR016039 GO:0016746
Dod03g1318 391 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 1 387 - -
Dod03g1318 391 SUPERFAMILY Thiolase-like 13 179 IPR016039 GO:0016746
Dod03g1318 391 PANTHER 3-KETOACYL-COA SYNTHASE 1 387 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1318 Dod-Chr3 16779352 16781589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1318 14 388 Miscellaneous Gene Families AT1G25450 55.467 3.03e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1318 K15397 - gmx:100783404 680.633