Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1313 ATGGCAGAACAGAGTTTCTTTGTTGGGGTGATAGGTAACATAATCTCAATTCTCATGTTTCTTTCTCCTGTGCATACTTTCGTGCGCATAATAAAGCACAAATCTACCGAAGATTTCTCGAGCATTCCTTATATTTGCACATTGCTGAATTCCTCCCTGTGGACTTACTATGGAATCATAAAGGCTGGAGAGTACCTCGTGGCCACTGTGAATGGCTTTGGCGTCATGGTGGAGACAATCTACATCATTCTATTTCTTATATATGCACCAAAAACGATGAGGGCCAAGACTGCCATTGTGGCTGTGATTTTAGATGTGGGGATCTTGGCAGCAGCAATAGTTATTACTCAACTAGCGTTGGAGGGAGAGGCTCGTACTAATGCCGTCGGTATCATGGGTGCAGGCCTTAACATTGTCATGTATGCCTCACCTTTGGCTGTCATGAAAACAGTGGTGACGACAAAGAATGTGGAATATATGCCATTCTTTCTTTCTTTTTTCTTCTTCCTAAACGGTGGCGTTTGGTTGTTTTACGCTTTTCTTGTTCGTGATTTGATCCTCGGGGTGCCAAATGGTACTGGATTTGTACTAGGGGCGACGCAGTTGGTGCTGTATGGGATCTATAGAAAAAGAACATCATCATCGAAGCACATTTCAAACGGATTGGAAGAAGGATGGCAGCATGAGCATCTCATCTCATCCTCAAGTCAGTCACAACATCATGAGAGGGAACAAAAACCTGTCTAG 747 0.4351 MAEQSFFVGVIGNIISILMFLSPVHTFVRIIKHKSTEDFSSIPYICTLLNSSLWTYYGIIKAGEYLVATVNGFGVMVETIYIILFLIYAPKTMRAKTAIVAVILDVGILAAAIVITQLALEGEARTNAVGIMGAGLNIVMYASPLAVMKTVVTTKNVEYMPFFLSFFFFLNGGVWLFYAFLVRDLILGVPNGTGFVLGATQLVLYGIYRKRTSSSKHISNGLEEGWQHEHLISSSSQSQHHEREQKPV* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1313 248 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 240 - -
Dod03g1313 248 PANTHER RAG1-ACTIVATING PROTEIN 1 4 240 - -
Dod03g1313 248 Pfam Sugar efflux transporter for intercellular exchange 7 92 IPR004316 GO:0016021
Dod03g1313 248 Pfam Sugar efflux transporter for intercellular exchange 128 212 IPR004316 GO:0016021
Dod03g1313 248 Gene3D - 6 92 - -
Dod03g1313 248 Gene3D - 124 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1313 Dod-Chr3 16747371 16753527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1313 1 230 Miscellaneous Gene Families AT4G15920 60.173 1.26e-96 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1313 K15382 - gmx:100808537 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1313 03 16747371 16753527 Dod03g1313 03 16747371 16753527 ECH