LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod03g1300	ATGCCATATTCCAGCGTTAAGGAGACGGTGCAGGATTTTCTCTCCAGTTTCCGCAACGAGTTGATCTCTCTTTTCTCCAGGTATGTGGCTAAGGGTAAAGGAATACTGCAACCACATGATCTGCTGGATGAGCTAGACAAGATTAATAAGGAGGATGGAGGGATGCAGAAACTCAAAGATAGCTCCTTTGTCAGGGTGCTACAATCTGCAAAGGAAGCTATAGTCCTGCCTCCTTTCGTGTCTATAGCTACGCGTCCTAGCCCTGGCGTTTGGGAGACTGTTGGCAATTATGTGCTTGAACTAGATTTTGAGCCCTTTAATGCAACATTCCCTCGACCAACCCGGTCATCCTTTATTGGCAATGGAGTTCAGTTTCTCAACAGGCATCTGTCATCATTCATGTTTCATAACAAAGAAAGTTTGGAGCCTCTTCTTGCATTTCTTCGCACACACAGATATGATGGCGATGCAATGATGCTCAATGACCGCATTCATAACATATTTAAGCTCCAGCCTTCCTTGGCAAAGGCAGAAGAATTACTTTCTAAGCTCTCACCAAATACACCGTATTCTGACTTTGAATATGAACTACGAGGATTGGGATTTGAAAGAGGTTGGGGTGATACAGCAGAGAGGGTGTCGGAAATGGTGCATCTTCTACTAGACATCCTTCAGGCTCCCGATCCAAACACCTTAGAGAGATTTCTAGGAAGAATTCCTATGGTGTTCAATGTCGTCATCATATCACCACATGGTTACTTTGGCCAAGCAAATGTCCTAGGTTTGCCAGATACTGGTGGACAGGTTGTTTATATTCTTGATCAAGTGCGTGCTTTGGAAAGTGAGATGCTACTCAGAATTCAAAAGCAAGGGCTTGATGTGTCCCCAAAAATTCTCATTGTTACGAGATTAATTCCAGAGGCAAAAGGAACAACATGTAATCAGAGACTGGAAAGAGTTAGTGGAACTGAGCACACACATATACTGAGAGTCCCTTTTAGAACTAAGAATGGAATTTTGAGAAAATGGATTCCGAGGTTTGATGTGTGGCCTTATCTAGAGACATTTGCAGAGGATGCATCAAACGAAATTGCTGCTGAGTTACAAGGAGTCCCAGATCTGATAATTGGCAACTACAGTGATGGAAATCTTGTTGCAACCTTATTATCTTATAAGCTAGGAATCACACAGTGCAACATAGCTCATGCATTGGGGAAGACAAAGTACCCGGACTCTGACATATATTGGAAAAAATATGACAACAAGTACCATTTCACTTGTCAATTCACAGCCGACCTGATTTCAATGAACAATGCTGACTTTATAATCACTAGTACGTACCAAGAAATTGCAGGAAGCAAGAGCAATGCTGGACAATATGAGAGCCACACAGCCTTCACTCTTCCAGGACTGTATCGAGTTGTTCGTGGCATTGATGTTTTTGATCCCAAGTTTAATATTGTGTCTCCAGGTGCAGACATGTGCATGTATTTTCCATACTCGGACAGAGAAAAGAGACTAACTTCTCTACATCGTTCAATTGAAGAACTGGTATATGGTGCAGAACAAAATGAAGAGCACATTGGCTTGTTAAATGATCGATCAAAGCCGATTATCTTTTCAATGGCAAGGCTTGATCGAGTGAAGAATATGACGGGGCTTGTTGAATGCTTTGGTAAGAGCTCCAAACTGAGAGAGCTTGTGAATCTTGTGGTAGTAGGCGGCTACATTGATATAAAGAAGTCTAGGGACAGAGAAGAAATGGGGGAGATAGAGAAAATGTATGGCCTCATAGAAACATACAACTTGCGTGGCCGGTTTCGCTGGATCAAGGCCCAGATGAATCGTGCACGAAATGGGGAACTCTACCGGTACATTGCTGATGTGAAAGGTGCTTTTGTGCAGCCTGCTCTTTATGAAGCGTTTGGCCTAACAGTTGTGGAAGCTATGACTAGTGGTCTTCCTACATTTGCCACGTGTCATGGCGGCCCTGCTGAGATAATTGAGCATGGTGTCTCTGGATTCCATATTGATCCACATCACCCTGATCAGGTTGCTGCAATCTTAATAAACTTTTTTGAGCAATGTCAGAGTGATCCTGGCTACTGGAACAAGATTTCTGAAGCAGGGCTTAGTCGCATCCATGAGAGGTATACGTGGAAGATATACTCTGAGAGGCTACTTACTTTAGCTGGTGTTTATGGCTTCTGGAAACATGTCTCTAAGCTGGAGAGGAGAGAAACTAGGCGATACTTGGAGATGTTTTACATTCTCAAGTTCAGGGATTTGGTAAGTTGCACTACCATCCCAGCAGATCTTAGTGTATTAAACTTTTATACCCTTCTTTCTAAGAGATTGTTTTGTGTTTTTCTTATTCTTCATTTTATTGTACCCTCTACCCAACCAATCAGTTGTGATCTCCTAACTCGTGAAAACATGGTGTCACTTTGTTTTAAAATGAATATGATATATGATAGTGTTCATGGCATCGTTTGA	2496	0.4231	MPYSSVKETVQDFLSSFRNELISLFSRYVAKGKGILQPHDLLDELDKINKEDGGMQKLKDSSFVRVLQSAKEAIVLPPFVSIATRPSPGVWETVGNYVLELDFEPFNATFPRPTRSSFIGNGVQFLNRHLSSFMFHNKESLEPLLAFLRTHRYDGDAMMLNDRIHNIFKLQPSLAKAEELLSKLSPNTPYSDFEYELRGLGFERGWGDTAERVSEMVHLLLDILQAPDPNTLERFLGRIPMVFNVVIISPHGYFGQANVLGLPDTGGQVVYILDQVRALESEMLLRIQKQGLDVSPKILIVTRLIPEAKGTTCNQRLERVSGTEHTHILRVPFRTKNGILRKWIPRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGITQCNIAHALGKTKYPDSDIYWKKYDNKYHFTCQFTADLISMNNADFIITSTYQEIAGSKSNAGQYESHTAFTLPGLYRVVRGIDVFDPKFNIVSPGADMCMYFPYSDREKRLTSLHRSIEELVYGAEQNEEHIGLLNDRSKPIIFSMARLDRVKNMTGLVECFGKSSKLRELVNLVVVGGYIDIKKSRDREEMGEIEKMYGLIETYNLRGRFRWIKAQMNRARNGELYRYIADVKGAFVQPALYEAFGLTVVEAMTSGLPTFATCHGGPAEIIEHGVSGFHIDPHHPDQVAAILINFFEQCQSDPGYWNKISEAGLSRIHERYTWKIYSERLLTLAGVYGFWKHVSKLERRETRRYLEMFYILKFRDLVSCTTIPADLSVLNFYTLLSKRLFCVFLILHFIVPSTQPISCDLLTRENMVSLCFKMNMIYDSVHGIV*	832

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod03g1300	831	CDD	GT4_sucrose_synthase	244	729	-	-
	Dod03g1300	831	Pfam	Glycosyl transferases group 1	525	703	IPR001296	GO:0016757
	Dod03g1300	831	PANTHER	SUCROSE SYNTHASE 2	1	94	-	-
	Dod03g1300	831	Gene3D	-	19	95	-	-
	Dod03g1300	831	Gene3D	Glycogen Phosphorylase B;	246	763	-	-
	Dod03g1300	831	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	261	730	-	-
	Dod03g1300	831	TIGRFAM	sucr_synth: sucrose synthase	95	764	IPR012820	GO:0005985\|GO:0016157
	Dod03g1300	831	Pfam	Sucrose synthase	4	94	IPR000368	GO:0005985\|GO:0016157
	Dod03g1300	831	Pfam	Sucrose synthase	96	519	IPR000368	GO:0005985\|GO:0016157
	Dod03g1300	831	Gene3D	-	112	241	-	-
	Dod03g1300	831	PANTHER	SUCROSE SYNTHASE 2	95	769	-	-
	Dod03g1300	831	Gene3D	Glycogen Phosphorylase B;	493	720	-	-
	Dod03g1300	831	PANTHER	-	1	94	IPR012820	GO:0005985\|GO:0016157
	Dod03g1300	831	PANTHER	-	95	769	IPR012820	GO:0005985\|GO:0016157

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod03g1300	Dod-Chr3	16581958	16590503	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod03g1300	5	772	Glycosyltransferase	AT4G02280	71.429	0.0	1217

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod03g1300	K00695		-	gmx:100788717	1356.66