Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1248 ATGAACAATAGACTGCACGACAAATCTTGTCATATCTTTATTTCTATTTTTCTTTTGGGTTGGGCTTGTCTTGTAGGTGGAAGACTTCCCATGACATGGTACCCACAGCATTATTTAACCAAAGTGCCCATGACAAACATGGACATGCGTCCCAACCCTGCAACTGGGTACCCAGGAAGAACCTACAGATTCTACAAGGGTCCAGTGGTATTCCCATTTGGTCACGGACTAAGTTACACCAGATTCTCTCACAGCCTAGTCCTTGCTCCCAAACAGGTCTCAGTGCCCTTGACCAGCCTCAAAGCCCTTACAAACTCAACCTGGTCAAGCAAAGCAATTAAGGTGAGCCATGCCAATTGTGGTGATGCATTAGAAGTTGGTTTCCATGTTGATGTGAAAAATGAAGGCTCAATGGATGGGACACATACCCTTTTGGTTTTCTCAAAGCCACCAGCTGGAAAATGGTCAGCAGATAAGCAATTGGTTAGCTTCTACAAAGTCCATGTACCTGCTGGCTCAAAGCAGCGGGTCCATGTTGGTGTTCATGTGTGCAACCACCTTTCCACTGTGGATGAGTTTGGGGTTCCAAGAATCCCAATGGGTGAACATGAACTCCAAATTGGTGATGTCAAGCATTCAATTTATGTCCAAACTCAGGACCAAATCAAGCATTAA 675 0.4489 MNNRLHDKSCHIFISIFLLGWACLVGGRLPMTWYPQHYLTKVPMTNMDMRPNPATGYPGRTYRFYKGPVVFPFGHGLSYTRFSHSLVLAPKQVSVPLTSLKALTNSTWSSKAIKVSHANCGDALEVGFHVDVKNEGSMDGTHTLLVFSKPPAGKWSADKQLVSFYKVHVPAGSKQRVHVGVHVCNHLSTVDEFGVPRIPMGEHELQIGDVKHSIYVQTQDQIKH* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1248 224 Pfam Fibronectin type III-like domain 146 209 IPR026891 -
Dod03g1248 224 Gene3D Immunoglobulins 104 224 IPR013783 -
Dod03g1248 224 SMART Fn3_like_2 142 211 IPR026891 -
Dod03g1248 224 PANTHER BETA-D-XYLOSIDASE 1 25 221 - -
Dod03g1248 224 Gene3D - 22 80 IPR036881 GO:0004553|GO:0005975
Dod03g1248 224 PANTHER SUGAR HYDROLASE-RELATED 25 221 IPR044993 GO:0009044|GO:0045493
Dod03g1248 224 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 26 82 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1248 Dod-Chr3 15795925 15796599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1248 26 218 Glycoside Hydrolase AT1G02640 56.477 2.92e-72 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1248 - - gmx:100805839 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1248 03 15795925 15796599 Dod03g1248 03 15795925 15796599 ECH