Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1236 ATGGCAACAACAGTTCTGTACCCTAAGGAAGACAAGGAGCATAGGATTCTTCTCTACGCTTGCCGCAATTGCAATCACGAGGAGGTTGCTGATAACAACATTGTGTATAGAACTAAGATACATCATTCTGTTGGAGAGGGCACTCAGGTGTCGCAGAATGTAGCTGCAGATCCTACTCTTCCTCGCACCAAGTCAGCTCGCTGCAGTCAATGCAACCATGGAGAAGCTGTTTTCTTCCAGGGAACAGCCAGAGGTGAAGAAGGAATGTGTCTTTTCTTCGTTTGCTGCAACCCAAACTGTGGACACCGATGGAGAGACTGA 321 0.4766 MATTVLYPKEDKEHRILLYACRNCNHEEVADNNIVYRTKIHHSVGEGTQVSQNVAADPTLPRTKSARCSQCNHGEAVFFQGTARGEEGMCLFFVCCNPNCGHRWRD* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1236 106 Gene3D - 39 106 - -
Dod03g1236 106 Gene3D - 3 38 - -
Dod03g1236 106 SMART Cys4_2 66 106 IPR001222 GO:0003676|GO:0006351|GO:0008270
Dod03g1236 106 CDD Zn-ribbon_RPB9 56 105 IPR034012 GO:0006379
Dod03g1236 106 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 4 106 - -
Dod03g1236 106 Pfam Transcription factor S-II (TFIIS) 67 105 IPR001222 GO:0003676|GO:0006351|GO:0008270
Dod03g1236 106 SMART rpol9cneu 5 50 IPR001529 GO:0006351
Dod03g1236 106 ProSiteProfiles Zinc finger TFIIS-type profile. 64 105 IPR001222 GO:0003676|GO:0006351|GO:0008270
Dod03g1236 106 SUPERFAMILY Zinc beta-ribbon 43 106 - -
Dod03g1236 106 PANTHER DNA-DIRECTED RNA POLYMERASE 4 106 IPR012164 GO:0006351
Dod03g1236 106 SUPERFAMILY Zinc beta-ribbon 4 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1236 Dod-Chr3 15643151 15646202 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1236 K03017 - nnu:104605091 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1236 03 15643151 15646202 Dod03g1236 03 15643151 15646202 ECH