Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1194 ATGACAAACTTCAAGCACCCATCTCTAATATGCACCACTGTGGTCGTAGCCACAATAATTTCATTAATATTGCCATTAGGTCACTGCAGGGTTATTTTGCGCCCAAATGATGCCAATCTCATTCAGGACACATGCAACAGAACACCCAATCCAAGCCTTTGCCTTCAAATCCTTCGATCAGACCCTCGTAGCTCTAGTGCAGATGTCAAAGGCCTAGCACTCATCATGGTAGATGTGATCAAAGCCAAAGCCAATGATGCATTAAGCAAGATCCAGAGACTTCTACAAGGTGGTGGAGACAAGAATGCCTTGAATTCATGTAGTGCCAAATATAAGGCAATTTTGGTTGGTGATGTGCCACAAGCCACTCAGGGGCTTCGGTTTGGGAACCCCAAGTTTGCTGAAGATGCGGCAAGTGACTCAGCTGTTGAGGCCAACTCTTGTGAGCATAGCTTCATCGCTGGGAAATCGCCACTCACCATTGAGAACAATGGCATGCGTGGTGTAGCAGATGTGACCAGAGCTATTGTCAGATTATTGCTTTAG 546 0.4597 MTNFKHPSLICTTVVVATIISLILPLGHCRVILRPNDANLIQDTCNRTPNPSLCLQILRSDPRSSSADVKGLALIMVDVIKAKANDALSKIQRLLQGGGDKNALNSCSAKYKAILVGDVPQATQGLRFGNPKFAEDAASDSAVEANSCEHSFIAGKSPLTIENNGMRGVADVTRAIVRLLL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1194 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 19 181 - -
Dod03g1194 181 Pfam Plant invertase/pectin methylesterase inhibitor 39 176 IPR006501 GO:0004857
Dod03g1194 181 CDD CIF_like 38 180 IPR034087 GO:0004857|GO:0043086
Dod03g1194 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 180 IPR035513 -
Dod03g1194 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 181 IPR035513 -
Dod03g1194 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 181 - -
Dod03g1194 181 SMART PMEI_2 36 176 IPR006501 GO:0004857
Dod03g1194 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 14 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1194 Dod-Chr3 14916027 14916817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1194 - - gmx:100813094 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1194 03 14916027 14916817 Dod03g1194 03 14916027 14916817 ECH