Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1177 ATGGTGAAGGTGCGGATGAACACGGCGGATGTGGCCGCGGAGGTCAAATGCCTCCGCCGCTTAATCGGAATGCGATGCTCCAATGTCTACGACCTCTCTCCCAAGACGTACGTTTTCAAGCTGATGAACAGTAGCGGAGTCTCGGAATCCGGAGAGAGCGAGAAGGTTCTCTTGCTCATGGAAAGCGGCGTCAGATTGCACAGCACTGTCTATATGCGTGACAAAAGCAATACACCTTCTGGTTTTACTCTCAAATTGAGGAGGCATATTAGGACTAGGAGGCTTGAAGATGTTAGACAACTTGGCTATGATCGGATTATTCTGTTTCAATTTGGATTGGGAGAGAATGCAAACTATGTTATATTGGAGCTGTATGCCCAGGGGAACATCCTCCTAACTGATTCTAATTTCACTGTCATGACTCTGCTGAGATCTCACAGGGATGATGATAAAGGGCTTGCAATCATGTCACGTCATCGTTATCCTATAGAAAGTTGCCGTGTTTTTGAGCAAACTACCACCAAAAAGTTGCAGACAGCCTTAATGACTTCTAAGGAAGACGATAATAATGATGAGGCTGGTAAGGTCAATGAAAATGAAGCTGATGGTTCTAATGTAGCAAGAGAAAAGCAAGGAGCCCGTAAAGGTGGGAAGTCATCTGCCACATTGAAAAGTGTCCTTGGGGAGGCACTCGGTTATGGACCTGCACTTTCTGAACATATAATATTGGATGCTGGGCTAATCCCCAATACAAAAGTTCCCAAAGATAAAACATGGGATAATGCTACTGTTCAGACTTTGGTCCAAGCTGTTGCGAAGTTTGAAGATTGGATGCTGGATGTTATTTCAGGTGAAATAGTTCCTGAAGGATACATTTTAATGCAGAACAGAAATTTGGGGAAGGATTCTTCCACATCTCTACCAGAAAGTGTTAGGCAGATGTATGATGAGTTCTGCCCAATATTACTCAACCAGTTTAAGTCAAGGGATTATATGAAGTTTGAGACATTTGATGCTTCCTTGGATGAGTTCTATAGCAAAATTGAGAGTCAAAGGGCTGAACAACAGCAGAAAGCCAAAGAAAACTCAGCTGCTCACAAGCTAAACAAAATACGTCAGGATCAGGAAAATCGAGTGCAAACTTTAAGGAAAGAAGCTTATCACTGTGTTAAGATGGCAGAATTGATAGAATACAACTTAGAAGATGTGGATGCTGCCATATTAGCTGTTCGTGTAGCTCTTGCAAAAGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCTGTCGCTAGTATCATTGACAAGCTCCATCTTGAGAGGAACTGTATGACTCTACTGTTGGTCAACAATCTTGATGAAATGGATGATGACGAGAAGACACTTCCTGTGGATAAGGTTGTTGAAGTTGATTTAGCTCTCTCAGCTCATGCCAATGCTCGGAGATGGTATGAGCTGAAGAAAAAGCAGGAGAGCAAGCAGGGAAAGACTATAACTGCGCATGAGAAGGCATTTAAAGCTGCTGAGAAAAAGACTCGCCGACAGCTTAATCAGGAAAAAACTGTTGCCACTATTTCACATATGCGCAAAGTTCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAACTATTTGGTTATCAGTGGACGTGATGCCCAACAAAATGAGATGATAGTGAAGCGTTATATGTCAAAAGGAGATCTGTATGTGCATGCTGATCTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAGCCTGGGCAACCAGTTCCTCCTCTGACCTTAAACCAAGCAGGATGTTTCACAGTATGCCATAGCCAGGCATGGGATTCAAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACTGCTCCCACAGGGGAATATCTTACAGTTGGGAGTTTCATGATCCGGGGAAAGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGCCTGCTATTTCGTTTGGATGAGAGTTCCTTGGGATCACATATAAATGAAAGGAGGGTAAGAGGCGAGGAGGAAGCAGTAGATGATTATGAAGAAACTGGCACAATTGAGGAGAAATCTGATTCAGAGTCTGAGAAGGATGTCTCTGATACAAAATCTGCTGCAGACTCGGAAAGGAATGGTAATTTGTCTGCAGATTCACATAAGCCTATTGCAGATTCATCTCAGAGTAGTTTGGGTGCTGTCAATGCTGAAACTACAATTTCAAATGATTTGCCTGGCCAAGAGATGAGTACATTATATTTGGTTGATGGGGAGAAGCTATCCGATATTAGTGGAAATGGCTTAGCATCTGTCACCCCTCAACTCGAGGAACTTATTGATCGTGCTCTGGGACTTGGATCTGTTGCTAAATCAAATAATAACTATGGAGTTGAGAACTCTAAGATTGATTTAAGCAGTGAGCATCATGGTGAAGAGAGCAAAGGTTCAGTAAGGGATAGACCTTATGTATCAAAAGCTGAGAGAAGAAAACTCAAAAAAGAACAGAAACATGGTGTAGCAGATTCAAATGTTGAACATGGGAAGGACGAATCAAAATTAACTGATATTTCTGCTAATCTACCTGCAAAAGAAGTTCAAAATTCAAAAACAGGTGGTCAAAAGATCAGCCGTGGTCAGAGGGCAAAACTTAAAAAGATAAAGGAGAAGTATGCCGATCAAGATGAGGAAGAAAGGAGCATCCGAATGGCATTATTGGCTTCTTCAGGAAAGTCAAACAGGAAGGAAGAGACATCAAGTACAAATGATGCATCAGACAAAGGGAAAAAACCTGGGAGTGGTCCTGCAGAAGCTCCAAAAATATGTTTCAAGTGTAAGAAGGCAGGTCACTTATCTCGGGATTGCAAGGAGCAACCAGATGATCATTCAATTGGTGAAGCTGACGAAAATCCTAGCATTTCCCAAGCAGATACGGTGGCAATGGAAGAAGATGACATTCATGAAATAGGAGAAGAAGAGAAAGAAAAACTAAATGATGTGGATTACTTGACAGGGAATCCACTCCCTAATGACATTCTCTTGTATGCTGTTCCTGTTTGTGGTCCTTATAGTGCAGTTCAGTCCTACAAATATCGGGTGAAGATAATTCCTGGATCACTAAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACCTCTTCAGCCACATGTCAGAAGCAACAAGCCGGGAGAAGGAATTGATGAAAGCCTGTACAGATCCTGAACTGGTTGCTTCAATTATTGGGAATGTTAAGATATCGGCAGCAGGCCTGACTCAATTGAAGCAGAAGCAAAAGAAAGGCAAGAAGATTGCCAAACAAGAAAGTTAG 3372 0.4211 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHSTVYMRDKSNTPSGFTLKLRRHIRTRRLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDSNFTVMTLLRSHRDDDKGLAIMSRHRYPIESCRVFEQTTTKKLQTALMTSKEDDNNDEAGKVNENEADGSNVAREKQGARKGGKSSATLKSVLGEALGYGPALSEHIILDAGLIPNTKVPKDKTWDNATVQTLVQAVAKFEDWMLDVISGEIVPEGYILMQNRNLGKDSSTSLPESVRQMYDEFCPILLNQFKSRDYMKFETFDASLDEFYSKIESQRAEQQQKAKENSAAHKLNKIRQDQENRVQTLRKEAYHCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLARMVKEEKKAGNPVASIIDKLHLERNCMTLLLVNNLDEMDDDEKTLPVDKVVEVDLALSAHANARRWYELKKKQESKQGKTITAHEKAFKAAEKKTRRQLNQEKTVATISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHADLHGASSTVIKNHKPGQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHINERRVRGEEEAVDDYEETGTIEEKSDSESEKDVSDTKSAADSERNGNLSADSHKPIADSSQSSLGAVNAETTISNDLPGQEMSTLYLVDGEKLSDISGNGLASVTPQLEELIDRALGLGSVAKSNNNYGVENSKIDLSSEHHGEESKGSVRDRPYVSKAERRKLKKEQKHGVADSNVEHGKDESKLTDISANLPAKEVQNSKTGGQKISRGQRAKLKKIKEKYADQDEEERSIRMALLASSGKSNRKEETSSTNDASDKGKKPGSGPAEAPKICFKCKKAGHLSRDCKEQPDDHSIGEADENPSISQADTVAMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYSAVQSYKYRVKIIPGSLKKGKAAKTAMNLFSHMSEATSREKELMKACTDPELVASIIGNVKISAAGLTQLKQKQKKGKKIAKQES* 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1177 1123 MobiDBLite consensus disorder prediction 352 372 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 705 722 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 968 991 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 183 215 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 814 954 - -
Dod03g1177 1123 Pfam NFACT N-terminal and middle domains 10 161 - -
Dod03g1177 1123 Pfam NFACT N-terminal and middle domains 219 533 - -
Dod03g1177 1123 SMART c2hcfinal6 956 972 IPR001878 GO:0003676|GO:0008270
Dod03g1177 1123 ProSiteProfiles Zinc finger CCHC-type profile. 957 972 IPR001878 GO:0003676|GO:0008270
Dod03g1177 1123 Pfam Zinc knuckle 956 972 IPR001878 GO:0003676|GO:0008270
Dod03g1177 1123 SUPERFAMILY Retrovirus zinc finger-like domains 941 975 IPR036875 GO:0003676|GO:0008270
Dod03g1177 1123 MobiDBLite consensus disorder prediction 183 219 - -
Dod03g1177 1123 Pfam NFACT protein C-terminal domain 1008 1101 IPR021846 -
Dod03g1177 1123 Gene3D - 951 998 - -
Dod03g1177 1123 Coils Coil 365 385 - -
Dod03g1177 1123 PANTHER - 3 1111 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 876 891 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 968 982 - -
Dod03g1177 1123 Pfam NFACT protein RNA binding domain 543 654 IPR008532 -
Dod03g1177 1123 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 901 917 - -
Dod03g1177 1123 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1111 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 818 869 - -
Dod03g1177 1123 MobiDBLite consensus disorder prediction 690 748 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1177 K24971 - gmx:100807437 1854.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1177 03 14602059 14613275 Dod03g1177 03 14602059 14613275 ECH